                         SEQUENCE LISTING

<110>  Institute of Molecular Medicine
       Tuteja, Amit
       Subodh, Swati
       Krishnamoorthy, Narayanswami
 
<120>   "IDENTIFICATION OF GENOMIC SIGNATURE FOR DIFFERENTIATING HIGHLY 
       SIMILAR SEQUENCE VARIANTS OF AN ORGANISM"

<130>  PCT0149

<160>  86    

<170>  PatentIn version 3.5

<210>  1
<211>  5072
<212>  DNA
<213>  Hepatitis B Virus- Representative DNA Sequence

<400>  1
gaattccact gccttccacc aagctctgca agaccccaga gtcaggggtc tgtattttcc       60

tgctggtggc tccagttcag gaacagtaaa ccctgctccg aatattgcct ctcacatctc      120

gtcaatctcc gcgaggaccg gggaccctgt gacgaacatg gagaacatca catcaggatt      180

cctaggaccc ctgcccgtgt tacaggcggg gtttttcttg ttgacaagaa tcctcacaat      240

accgcagagt ctagactcgt ggtggacttc tctcaatttt ctagggggat cacccgtgtg      300

tcttggccaa aattcgcgat ccccaacctc caatcactca ccaacctcct gtcctccaat      360

ttgtcctggt tatcgctgga tgtgtctgcg gcgttttatc atattcctct tcatcctgct      420

gctatgcctc atcttcttat tggttcttct ggattatcaa ggtatgttgc ccgtttgtcc      480

tctaattcta ggatcaacaa caaccagtac gggaccatgc aaaacctgca cgactcctgc      540

tcaaggcaac tctatgtttc cctcatgttg ctgtacaaaa cctacggatg gaaattgcac      600

ctgtattccc atcccatcgt cttgggcttt cgcaaaatac ctatgggagt gggcctcagt      660

ccgtttctct tggctcagtt tactagtgcc atttgttcag tggttcgtag ggctttcccc      720

cactgtttgg ctttcagcta tatggatgat gtggtattgg gggccaagtc tgtacagcat      780

cgtgagttcc tttataccgc tgttaccaat tttcttttgt ctctgggtat acatttaaac      840

cctaacaaaa caaaaagatg gggttattcc ctaaacttca tgggttatgt aattggaagt      900

tggggaacat tgccacagga tcatattgta caaaaaatca aacactgttt tagaaaactt      960

cctgttaaca ggcctattga ttggaaagta tgtcaaagaa ttgtgggtct tttgggcttt     1020

gctgctcctt ttacacaatg tggatatcct gccttaatgc ccttgtatgc atgtatacaa     1080

gctaaacagg ctttcacttt ctcgccaact tacaaggcct ttctaagtaa acagtacatg     1140

aacctttacc ccgttgctcg gcaacggcct ggtctgtgcc aagtatttgc tgatgcaacc     1200

cccactggct ggggcttggc cataggccat cagcgcatgc gcggaacctt tgtggctcct     1260

ctgccgatcc atactgcgga actcctagcc gcttgttttg ctcgcagccg gtctggagcg     1320

aaactcatcg gaactgacaa ttctgtcgtc ctctcgcgga aatatacctc gtttccatgg     1380

ctrctaggyt gtrctgccaa ctggatyctt cgmgggacgt cctttgttta cgtcccgtcg     1440

gcgctgaatc ccgcggacga cccctckcgr ggccgcttgg grctstmtcg tccccttctc     1500

cgtctgccgt wccrkccgac cacggggcgc acctctcttt acgcggtctc cccgtctgtg     1560

ccttctcatc tgccggtccg tgtgcacttc gcttcacctc tgcacgttgc atggagacca     1620

ccgtgaacgc ccatcagrtc ctgcccaagg tcttacataa gaggactctt ggactcycag     1680

caatgtcaac gaccgacctt gaggcctact tcaaagactg tgtgtttaar gactgggagg     1740

agytggggga ggagattagg ttaaaggtct ttgtattagg aggctgtagg cataaattgg     1800

tctgcgcacc akcaycatgc aactttttca cctctgccta atcatctctt gtacatgtcc     1860

cactkttcaa gcctccaagc tgtgccttgg rtggctttgg ggcatggata gaacaacttt     1920

gccatatggc ctttttggct tagacattga cccttataaa gaatttggag ctactgtgga     1980

gttactctcr tttttgcctt ctgacttctt tccttccgtc mgrgatctmc tagayacmgc     2040

ctcrgctctr tatcgrgaag ccttagagtc tcctgagcat tgctcacctc accatachgc     2100

actcaggcaa gccattctct gctgggggga attratgact ctagctacct gggtgggtaa     2160

taatttggaa gatccagcat cyagggatct wgtagtmaat tatgttaata ctaacrtggg     2220

hytaaagatc aggcaaytmt tgtggtttca tathtcttgc cttacttttg gaagagarac     2280

tgtmcttgar tatttggtct ctttcggagt gtggattcgc actccwccag cytatagacc     2340

accaaatgcc cctatcttat caacacttcc ggaaactact gttgttagac gacgrgaccg     2400

aggcaggtcc cctagaagaa gaactccctc gcctcgcaga cgmagatctc matcgccgcg     2460

tcgcagaaga tctcaatctc gggaatctca atgttagtat tccttggact cataaggtgg     2520

gaaayttyac kgggctttay tcytctacwg ymcctatctt taatcctgaa tggcaaacyc     2580

cttcytttcc taarattcat ttacawgarg acattrytaa taggtgtcar caatttgtrg     2640

gccctctcac tgtaaatgaa aaragaagay tgaaattaat tatgcctgct agrttytatc     2700

cyamcmrcac waaatatttg ccyttagaca aaggrattaa accttattat ccwgatcakg     2760

tagttaatca ttacttycaa accmgacatt atttacatac tctttggaag gckggkattc     2820

tatataagmg rgaaacyaca cgtagcgcmt cattttgcgg gtcaccatat tcttgggaac     2880

aagagctaca kcatgggagg ttggtcatca aaacctcgca aaggcatggg gacgaayctt     2940

tctgttccca aycctctggg attctttccc gatcatcagt tggaccctgy attcggagcc     3000

aaytcaaaca atccagattg ggacttcaac cccrtcaagg acsactggcc asmagccaac     3060

cargtaggag tgggagcatt cgggccargg ytcacyccyc cacacggmgg trttttgggg     3120

tggagccctc aggctcaggg catrttgrcc mcagtgycar cartkcctcc tcctgcctcc     3180

rccaatcggc agtcaggaag gcagcctact cccatctctc cacctctaag agacagtcat     3240

cctcaggcca tgcagtggaa ttccacwgcy ttccaccaar ctctgcarga tcccagagtc     3300

aggggyctgt atyttcctgc tggtggctcc agttcaggaa castmaaccc tgytccramt     3360

attgcctctc acatctcgtc aatctcckcg aggaytgggg accctgtgmc gaacatggag     3420

aacatcacat caggattcct aggacccctg ctcgtgttac aggcggggtt tttcttgttg     3480

acaagaatcc tcacaatacc gcagagtcta gactcgtggt ggacttctct caattttcta     3540

gggggatcwc ccgtgtgtct tggccaaaat tcgcagtccc caacctccaa tcactcacca     3600

acctcctgtc ctccaatttg tcctggttat cgctggatgt gtctgcggcg ttttatcata     3660

ttcctcttca tcctgctgct atgcctcatc ttcttattgg ttcttctgga ttatcaaggt     3720

atgttgcccg tttgtcctct aattccagga tcaacaacaa ccagyacggg accmtgcaaa     3780

acctgcacga ctcctgctca aggcaactct atgtttccct catgttgctg tacaaaacct     3840

acggatggaa attgcacctg tattcccatc ccatcrtcyt gggctttcgc aaaataccta     3900

tgggagtggg cctcagtccg tttctcttgg ctcagtttac tagtgccatt tgttcagtgg     3960

ttcgtagggc tttcccccac tgtttggctt tcagctatat ggatgatgtg gtaytggggg     4020

ccaagtctgt acagcatckt gagtcccttt ataccgstgt taccaatttt cttttgtcty     4080

tgggtataca tttaaaccct aacaaaacaa aragatgggg ttattcmctr aayttcatgg     4140

gytayrtaat tggaagttgg ggwacwttgc cacaggatca tattgtacaa aaratcaaac     4200

actgttttag aaaacttcct gtyaaymgrc ctattgattg gaaagtatgt caaagaattg     4260

tgggtctttt gggctttgcy gctccattta cacaatgtgg wtatcctgcm ttaatgcctt     4320

tgtatgcatg tatacaagcw aaacaggctt tyactttctc gccaacttac aaggcctttc     4380

taagtaaaca gtayatgaac ctttaccccg ttgcycggca acggcctggt ctgtgccaag     4440

tgtttgctga cgcaaccccc actggctggg gcttggccat mggccatcag cgcatgcgyg     4500

gaacctttgt ggctcctctg ccgatccata ctgcggaact cctrgccgct tgttttgctc     4560

gcagccggtc tggagcaaar ctcatcggra ctgayaattc tgtcgtccty tckcggaaat     4620

atacatcrtt tccatggctg ctaggctgta ctgccaactg gatccttcgc gggacgtcct     4680

ttgtttacgt cccgtcggcg ctgaatcccg cggacgaccc ctctcggggc cgcttgggac     4740

tctctcgtcc ccttctccgt ctgccgttcc agccgaccac ggggcgcacc tctctttacg     4800

cggtctcccc gtctgtgcct tctcatctgc cggtccgtgt gcacttcgct tcacctctgc     4860

acgttgcatg gagaccaccg tgaacgccca tcagatcctg cccaaggtct tacataagag     4920

gactcttgga ctcccagcaa tgtcaacgac cgaccttgag gcctacttca aagactgtgt     4980

gtttaaggac tgggaggagc tgggggagga gattaggtta aaggtctttg tattaggagg     5040

ctgtaggcac aaattggtct gcgcaccagc ac                                   5072


<210>  2
<211>  10276
<212>  DNA
<213>  Human Immunodeficiency Virus: Representative DNA sequence


<220>
<221>  misc_feature
<222>  (5598)..(5598)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6537)..(6537)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6852)..(6852)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6950)..(6950)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (7022)..(7022)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (7410)..(7410)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (8144)..(8144)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (9316)..(9316)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (10219)..(10219)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (10247)..(10247)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (10255)..(10255)
<223>  n is a, c, g, or t

<400>  2
tggawgggyt aatttactcc aagaaaagrc aagamatctg gaagggctaa ttcactccca       60

acgaagacaa gatatccttg atctgtggat ctaccacaca caaggctact tccctgatta      120

gcagaactac acaccagggc cagggatcag atatccactg acctttggat ggtgctacaa      180

gctagtacca gttgagccag agaagttaga agaagccaac aaaggagaga acaccagctt      240

gttacaccct gtgagcctgc atggaatgga tgacccggag agagaagtgt tagagtggag      300

gtttgacagc cgcctagcat ttcatcacat ggcccgagag ctgcatccgg agtacttcaa      360

gaactgctga catcgagctt gctacaaggg actttccgct ggggactttc cagggaggcg      420

tggcctgggc gggactgggg agtggcgagc cctcagatcc tgcatataag cagctgcttt      480

ttgcctgtac tgggtctctc tggttagacc agatctgagc ctgggagctc tctggctarc      540

trgggaaccc actgcttaag cctcaataaa gcttgcykks mgygswtyma gtagtgtgtg      600

cccgtctgtt rtgtgactct ggtarctaga gatccctcag acccttttag tyagygtrga      660

aaatctctag cagtggcgcc cgaacagggg acbygaaagc gaaagdraaa ccagagragm      720

tctctcgacg cagggactcg gcttgctgaa gaagaagcgc gcrcggcaag aggcgagggg      780

cggcgygact ggtgagtacg cctaaawaat taattttgac tagcggaggg ctagaaggag      840

agagatgggt gcgagagcgt cartattaag cgggggavaa ttagatmsat gggaraaaat      900

tcggttamgg ccaggrggaa agaaaarata tarrytaaaa catwtagtat gggcaagcag      960

rgagctagaa cgattygcas tyaaycctgg cctdttrgar acakcagaag gctgtagaca     1020

awtaytgrsa cagctacarc cadsycttca racaggatca gaagaactta ratcaktatw     1080

taatacarta gcarycctct attgtgtrca tsmaargata gakrtaarag acaccaarga     1140

rgctttagav aaratagagg aagarcaaaa caaawgyaag aaamrrgcac agcaagcaca     1200

gcaagcwrma gctgacrcag ramamarcar ycmggtyagc caragaggta gcagcagtca     1260

aaattaccct atagtgcara aymtbcargg gcaaatggta catcargcma tatcacctag     1320

aactttaaat gcatgggtra aagtartagr agaraaggcy ttyagcccag argtratacc     1380

yatgtttkca gcrttatcag aaggagccac cccacaagat ttaaayacca tgctaaacac     1440

agtggggggg acatcaagca gccatgcaaa tgttaaaaga raccatcaat gaggaagctg     1500

cagaatggga tagadtrcat ccagygcawg cmgggcctat hgcaccaggc cagatragag     1560

amccaagggg aagtgacata gcaggaacta ctagtaccct tcaggaacaa atarsatgga     1620

tgacamataa tggtggcaac ccacctatcc cagtrggaga aathtayaar aratggataa     1680

tcmtgggatt aaataaaata gtaagratgt atagycctac cagcattytr gacataarac     1740

aaggaccaaa ggaacccttt agrgrytatg tagaycggtt ctataaract ytaagagcyg     1800

agcaagcytc acaggadgta aaaaattgga tgacagaaac cttgttggtc caaaaykcga     1860

acccagattg yaaractatw ttaaaagcat trggaccagc rgctacacta gargaaatga     1920

tgacmgcatg tcagggagtr ggrggwccyr gccayaargc ragagttttg gckgargcaa     1980

tgagccargt racaagtart kcaacavstr ccataatgat gcararaggc aatywtagra     2040

accaamgaar grytgttarg tgtttcaatt gtggcaaagw aggrcacaya gccmraaatt     2100

gcagggcycc taggaaraag ggctgttgga ratgtggaar rgaaggacac caaatgaaag     2160

attgtrmtsa ragacaggct aattttttag ggaaratytg gccttccyac aarggraggc     2220

cagggaattt tcttcagagc agacccccag cagagccrac agccccktct cagagcagac     2280

cagagccaac agccccacca gmagcagaga gcttcaccac cagagaggty tggggwrgrg     2340

acaacaactc ccyctcagar gcaggagmag ccrayagaca agraacaggg acwactrtat     2400

cctttarctk ccctcarrtc actctttggc arcgacccmt hgtcrcaata argatagggg     2460

ggcarctaaa ggaagctcta ttagayacwg grgcagatga tacagtatta gaagaaatgr     2520

rtttrccmgg aagatggaaa ccaaaaatga tagggggaat tggaggtttt atcaaagtaa     2580

gacartatga tcagrtacyy rtagaaatyw gtggamataa arctataggt acagtrttar     2640

taggacctac acctrtcaac ataattggaa gaaatytgtt ractcagmtt ggytgcacty     2700

taaattttcc yattagycct attgaractg taccagtaaa rttraagcca ggaatggatg     2760

gyccaaragt yaaacaatgg ccattracag aagaaaaaat aaaagcatta gyagaaattt     2820

gtrcagarmt ggaaaaggaa ggraaaattt caaaaattgg gcctgaaaat ccatacaata     2880

ctccartatt tgcyataaar aaraaagaca gyactaaatg gagaaartta gtagatttya     2940

gagaacttaa taararaact caagacttct gggaagttca attaggaaya ccacayccyg     3000

crgggttraa aaagaaaaaa tcagtaacrg tactggaygt gggwgatgca tatttytcag     3060

ttcccttaga trragamttc agraartata ctgcatttac catacckagt ryaaacaayg     3120

agacaccagg gattagatat cagtayaatg tgcttccaca gggatggaaa ggatcaccag     3180

caatattcca awgtagcatg acaaaaatyt tagagccytt tagaaaacaa aatccagama     3240

tagttatcta tcaatacrtg gatgatttgt atgtaggatc tgayttagar atrgggcagc     3300

atagaacaar aatagargar ctragacaac atytgttrar gyggggaytt rmcacaccag     3360

ayaaaaaaca tcagaaagaa ccyccattcc tttggatggg ktatgaactc catcctgata     3420

aatggacagt acarcctata ryrctgccrg araargacvs ctggactgtc aatgacatac     3480

agaagttagt gggraaattg aattgggcaa gtcagatwta yscagggatt aaagtaargc     3540

avttatgtaa actycttarr ggarcyaaag cactaacaga artartaccw ctaacarmag     3600

argcagaryt agaaytrgca gaaaacagrg arattctaaa agaamcagta catggagtgt     3660

aytatgaccc awcaaaagay ttaatagcag aaatacagaa gcagggrcaa ggccaatgga     3720

catatcaaat ttatcaagag ccatttaaaa atctraarac aggaaartat gcaarartga     3780

ggggtrccca cacwaatgat gtaaaacart taacagaggc agtgcaaaaa atarcyacag     3840

aaagcatagt aatatggggm aagagatctc ctaaattyar aytrcccata caaaargaaa     3900

catgggaadc atggtggayr gaktattggc aagccacctg gattcctgag tgggartttg     3960

tyaatacccc tcccttagtg aaattatggt accagttaga raargarccc atagtaggag     4020

cagaaacytt ctaygtagat ggggcrgcta ayagggarac taarytagga aaagcaggat     4080

atgtkacyra yagaggraga caaaargytr tchcymtram kgacacaaca aatcaraaga     4140

ctgagttaca agcaattyay ctagcwytgc argattcrgg aytagaagta aayatagtaa     4200

cagactcaca atatgcatta ggaatcattc aagcacaacc agatmaragt gaatcagagw     4260

tagtcartca aataatagag sagttaatam aaaaggaaar ggtctayctr rcatgggtrc     4320

cagcacacaa rggaattggr ggwaatgaam aagtagataa attagtyagt dctggratca     4380

ggaaagtact atttytagat ggaatagata aggcccarga wagavcatga raaatatcac     4440

artaattgga rarcaatggc tagtgatttt aacctgccac ctrtrgtagc aaaagaaata     4500

gtagccwgyt gtrataaatg gycargctaa aaggrgaagc catgcatgga cargtagact     4560

gtagtccagg aatatggcar ytagaytgta cacatttaga aggaarartt atcctrgtag     4620

cagttcatgt rgccagtggr tatatagaag cagaagtkat yccagcagar acagggcarg     4680

aaacagcata ytttctytta aaaytagcag gaagatggcc agtaaaracm atacatacwg     4740

acaatggcms caayttcayc rgtrstrcrg tyarggcygc ctgttggtgg gcrggrrtca     4800

agcaggaatt tggmatyccc tacaatccyc aaagtcaagg agtagtagaa tctatraata     4860

aagaattaaa gaaaattata ggacaggtaa gagakcaggc tgaacatcty aaracagcag     4920

tacaaatggc agtattyatc cacaatttta aargaaragg ggggattggg grstayagtg     4980

caggggarag aatartagac ataatagcaa cagacataca racyaaagaa ytacaaaarc     5040

aaattacaaa aattcaaaat tttcgggtyt attacaggga cagcagaray ccactttgga     5100

aaggaccagc aaagctycts tggaaaggtg aaggggcagt agtaatacaa gataakagtg     5160

acataaaagt agtrccaaga agaaaagyaa aratcattag ggattatgga aaacagatgg     5220

caggtgatga ttgtrtggca agtagacagg atgaggatta raacatggaa aagtttagtr     5280

aaayaccata tgtatrkdtc arrgaaagct arrrrmtggt tktatagaca tcactatsaa     5340

agymytcatc caarrataag ttcagaagta cayatcccac tagrrgabga ttctrrmttr     5400

gtartaahra catattgggg tctgcataca ggrgaaagag amtggcattt gggycargga     5460

gtctccatag aatggaggra arrragatat avyacacaar tagacccwgr mctagcagac     5520

caactaattc atvtrtatta ytttgahtgt tttwcagamt ctgcyataag aaakgcchtr     5580

ttaggacryw karttagncm tarktgtgaa tatcaagcag gacayaacaa ggtaggrtcy     5640

ytacartact tggcmctarc agyaktaaka amaccaaara vrakaaagcc acctttgccy     5700

agtgtyrvga arctracrga ggayagatgg aacaagyccc rgmagaccaa gggccacaga     5760

grgagccaya caatgmatgg acactagarc ttytagagga rcttaagart gaagctgtka     5820

gacaytttcc yaggrbwtgg cthcayrrmt taggrcaaya tatctatgaa amttatgggg     5880

ayacttggry aggagtggar gccmtaataa gaatdctgca acaactgctg tttatycatt     5940

ttcagrattg grtgtcraca tagcagaata ggcrttaata yycbacrrrg gagagyaagr     6000

aatggakcca gtagayccta ractagagcc ctggaagcat ccaggaagtc agcctarrac     6060

kgcttgtamc amttgctatt gtaaaaartg ttgctttcat tgccaagttt gyttcayamv     6120

aaaagsctta ggcatctcct atggcaggaa gaagcggaga cagmgacgaa garctsmtcm     6180

rrachgtcmg aytvatcaag ywtctytayc aaagcagtra gtartrytaa tyaatatmtg     6240

taaygkywkw wttahwwmtm mbctwtahmw atmkawyags aatagtagca ttagtartag     6300

yarbaatamt agcaatagtt gtgtggwcya tagtrwtmwt agaatatagr aaaatattaa     6360

racaaarraa aatagayarg wtaattgata grmtaakaga magagcagaa gayagtggca     6420

atgaragtga aggrgahaya ksarsamytr tsrrswykbg grtggagatg gggcaytacg     6480

ctcaccwtgc tccttggray rttrctgatg atywgtagwg ctratgctac agaamanttg     6540

tgggtmacag tctaytatgg ggtacctgtg tggarrgaag caammacyac tctmttttgt     6600

gcrtcagatg ctaaagcwta tgadacagar gtacataatg tttgggccac acatgcctgt     6660

gtacccacag acccyaaccc acaagarvta gtattrgwra atgtgacaga aaaytttaay     6720

ryrtggrmaa atracatggy agaacaratg catgargaya taatcagttt atgggatsaa     6780

agyctaaarc catgtgtraa attaacycca ctctgtgtta stttaaaktg yamtgattat     6840

ttrrttartg vnamyrhyac tarwaacagt agtgtawmya myavtrbyrs ygvyycyamt     6900

amtagtacca ctagcactgt gggtagcact gccagcacta gcactrvdrn trrhwysrmw     6960

mwkrhkrmrr grgarwtrar waactgctct ttcmakrtca scacarvcat arrvrrtarr     7020

dnrmagaras artwtgcayt bttkwrtaar cwtgatrtar tacmaatrra taatratavt     7080

wmggaaaacg ayargactaa taatagtaay twtadrytra yamrttgtaa yasctcagtc     7140

attacmcagg cytgtccaaa ggtrtccttt sarccaatyc ccatayatta ttgtrccccr     7200

gctggkttyg cgattctaaa rtgtaawrat aarwmgttya rtggaamvgg asmatgyama     7260

aatgtcagca cagtrcaatg tacacatgga attargccag trgtrtcwac ycaaytrctg     7320

ytraatggca gtctagcaga agtggaagak rtartaatya gatcwvwmaa tttyacrgac     7380

aatryyaaaw ccataatagt acarctgaan rmahctgtar awattmaytg tayaagrccy     7440

aacaaywata caagraaavs watmmvtatc cagagrggac sagggaragy awwtkwtrca     7500

ayagrtgcaa cwvraataat aggaratatr agacragcay attgtaacmt tagtrrmrca     7560

aaatggaatr acactttarr mmrgrtagyt rvmaaattaa ragaahwatw tggarrbaag     7620

aayaawacaa tartctttaa khmatcaaac tcaggaggrg ayccagaaat tgtwaygcac     7680

asttttawtt gtrgagggga atttttctwy tgyaaywcaa cmmarytrtt taatrgyayk     7740

tggbwtaata gcrhkaryrv wdvkwgbamt rrwrskksra atrrhvmwrv wgrdycarrw     7800

rrhamwatma smctcccatg yagaataaaa caaattrtaa acakrgtggc agrragtagg     7860

aaaagcaatg tatgcccctc ccatyrvwgg acaaattmrm tgywcmtcaa ayatyacagg     7920

gctrmtatta acaagrgatg gwggyrrsma hrryrrsamb aayrrswcyg ggrasacrga     7980

rrtcttyaga cctggaggag garatatgar rgacaattgg agaagtgaay tatataaata     8040

taaagtagta raaattgarc cattrggagt agcacccacy amggcaaaga gamgagtggt     8100

gcagagrgaa aaagaaaaaa gagcartrrs rttamtagga gctntgttcc ttgggtttct     8160

tgggagcagc aggaagcact atgggcgcag cstcartrrc gctgacggta cagrccagac     8220

wmttattgtc tggtatagtg carcagcara acaayytgct gagggctatt gaggcgcaac     8280

arcatctgyt gcaactcacr gtctggggca tyaagcagct ccaggcaaga rtcytrgctr     8340

trgaaagata cctavrggat caacagctcc trggratttg gggttgctct ggaaarctca     8400

tytgcmccac trctgtgcct tggaatgcta gttggagtaa taaatctmkr rrwsarattt     8460

ggrakmacay gacctggakg sartgggava ragaaattva yaattacaca rrywwaatay     8520

aydmyytamt tgvaramtcg carawmcarc ragaaawraa tgaacwagaw ytaytrvvat     8580

trgatamatg ggcarrtttg tggaattggt ttrrcataac amahtggctg tggtatataa     8640

aawtattyat aatgatagta ggagghttrr taggkttaag aatarttttt rytgtamttt     8700

ctatartgaa tagrgttagg magggatayt caccattrtc rttbcagacc cdcctcccar     8760

cycmgagggg acccgacagg cccgraggaa ymgaagaaga aggtggagag agagacagag     8820

acrsatccrk dmsmttagtg rahggatyct yrgcamtywt ctgggwcgay ctrcggarcc     8880

tgtkyctctt cmkctaccac cgmttgagag acttactctt gattgtrryg aggaytstgg     8940

aacttctggg acgcmgcagy ctacttctgg gacgcagggg gtgggarryy ctcaartayt     9000

ggtggaatct cctrcartat tggaktcagg aactaargrr tagtgcyrtt aryttgytya     9060

ayrccayagc yatagyagta gcygagggga cagatagggt tatagaarya dtrcwargar     9120

yttdtagagc yatyckcmac atacctrbaa gaatmagaca gggcttrgaa agrvytttrc     9180

tataaygrtg ggtrgmaagt ggtcaaaamr taratskrkd rbkggrtggc ctrmdrtrag     9240

rgaaagccca atgmramgar cyrmrccars rratagaaca agacaagcaa carrasmagc     9300

tgagccagca gcaganrgrg tgggascagy atctmgagac ytggararac atggrgcamt     9360

cacaagyagc aatacagcag ctamyaatgc tgmttgtgyc tggctagaag cacaagarga     9420

dgargrgagt gadgtgggyt tyccagtcav acctcaggtr ccyttaagrc caatgactta     9480

caaggsagct btrgatctya gccacttttt aaaagaarag gggggactgg aagggctart     9540

tyactcccar mrragacarg atatycttga tctgtggrtc taycayacac aaggctwctt     9600

ccccwgattr gsakaaytac acaccagggc cagggrgyca gatwyccmct gayctttgga     9660

tggtgctwya agytagtacc agtkgadcca gabvagrtag aaraggccam traaggrgar     9720

aacamcwryt tgttacaccc krtrarccwr catgggatrg ahgacccrga garagaagtr     9780

ttarwgtgga rgtttgacag ycgcctrgca ytbcrtcacr tggcccgrga gvwrcatccg     9840

gagtactwca aaaactgctg acarractgc tgacaycgct gctgacacag rrvtactaca     9900

agaaatgctg acaccgagct kctacaaggg actttccrct ggggactttc crggggaggy     9960

gtggcctggg cggrachggg gagtggygar ccctcagats ctgcatataa gcagctgctt    10020

tytgcctgta ctgggtctct ccyrgttaga ccagatcwga gccygggagc tctctggcct    10080

arctrgggaa cccactgctt aragcctcaa tctawagskt smcytrartr cwyyrrskdb    10140

ygbkygsssv wbbrhkstrk kacymkkkka wcyagasmws sywsaramss yywwwgwmrg    10200

tgwgramaay ykytwgywnc accctatgag ccaacatggg atagatnacc cgganaaaga    10260

agtattattg tggaag                                                    10276


<210>  3
<211>  1905
<212>  DNA
<213>  Hepatits B Virus Genotype A: Consensus DNA Sequence

<400>  3
ttccactgcc ttccaccaag ctctgcaaga ccccagagtc aggggtctgt attttcctgc       60

tggtggctcc agttcaggaa cagtaaaccc tgctccgaat attgcctctc acatctcgtc      120

aatctccgcg aggaccgggg accctgtgac gaacatggag aacatcacat caggattcct      180

aggacccctg cccgtgttac aggcggggtt tttcttgttg acaagaatcc tcacaatacc      240

gcagagtcta gactcgtggt ggacttctct caattttcta gggggatcac ccgtgtgtct      300

tggccaaaat tcgcgatccc caacctccaa tcactcacca acctcctgtc ctccaatttg      360

tcctggttat cgctggatgt gtctgcggcg ttttatcata ttcctcttca tcctgctgct      420

atgcctcatc ttcttattgg ttcttctgga ttatcaaggt atgttgcccg tttgtcctct      480

aattctagga tcaacaacaa ccagtacggg accatgcaaa acctgcacga ctcctgctca      540

aggcaactct atgtttccct catgttgctg tacaaaacct acggatggaa attgcacctg      600

tattcccatc ccatcgtctt gggctttcgc aaaataccta tgggagtggg cctcagtccg      660

tttctcttgg ctcagtttac tagtgccatt tgttcagtgg ttcgtagggc tttcccccac      720

tgtttggctt tcagctatat ggatgatgtg gtattggggg ccaagtctgt acagcatcgt      780

gagttccttt ataccgctgt taccaatttt cttttgtctc tgggtataca tttaaaccct      840

aacaaaacaa aaagatgggg ttattcccta aacttcatgg gttatgtaat tggaagttgg      900

ggaacattgc cacaggatca tattgtacaa aaaatcaaac actgttttag aaaacttcct      960

gttaacaggc ctattgattg gaaagtatgt caaagaattg tgggtctttt gggctttgct     1020

gctcctttta cacaatgtgg atatcctgcc ttaatgccct tgtatgcatg tatacaagct     1080

aaacaggctt tcactttctc gccaacttac aaggcctttc taagtaaaca gtacatgaac     1140

ctttaccccg ttgctcggca acggcctggt ctgtgccaag tatttgctga tgcaaccccc     1200

actggctggg gcttggccat aggccatcag cgcatgcgcg gaacctttgt ggctcctctg     1260

ccgatccata ctgcggaact cctagccgct tgttttgctc gcagccggtc tggagcgaaa     1320

ctcatcggaa ctgacaattc tgtcgtcctc tcgcggaaat atacctcgtt tccatggctr     1380

ctaggytgtr ctgccaactg gatycttcgm gggacgtcct ttgtttacgt cccgtcggcg     1440

ctgaatcccg cggacgaccc ctckcgrggc cgcttgggrc tstmtcgtcc ccttctccgt     1500

ctgccgtwcc rkccgaccac ggggcgcacc tctctttacg cggtctcccc gtctgtgcct     1560

tctcatctgc cggtccgtgt gcacttcgct tcacctctgc acgttgcatg gagaccaccg     1620

tgaacgccca tcagrtcctg cccaaggtct tacataagag gactcttgga ctcycagcaa     1680

tgtcaacgac cgaccttgag gcctacttca aagactgtgt gtttaargac tgggaggagy     1740

tgggggagga gattaggtta aaggtctttg tattaggagg ctgtaggcat aaattggtct     1800

gcgcaccakc aycatgcaac tttttcacct ctgcctaatc atctcttgta catgtcccac     1860

tkttcaagcc tccaagctgt gccttggrtg gctttggggc atgga                     1905


<210>  4
<211>  3217
<212>  DNA
<213>  Hepatitis B Virus- Genotype B: Consensus DNA Sequence

<400>  4
aactccacca ckttccacca aactcttcaa gatcccagag tcagggcyct gtactttcct       60

gctggtggct ccagttcagg aacagtrarc cctgytcwga ayactgyctc wkccatatcg      120

tcaatcttat cgamgactgg ggaccctgtr ccgaacatgg agaacatcgc atcaggactc      180

ctaggacccc tgctcgtgtt acaggcgggg tttttctygt tgacaaaaat cctcacaata      240

ccacagagtc tagactcgtg gtggacttct ctcaattttc tagggggaac acccgtgtgt      300

cttggccaaa attcgcagtc ccaaatctcc agtcactcac caacytgttg tcctccratt      360

tgtcctggtt atcgctggat gtgtctgcgg cgttttatca tcttcctctg catcctgctg      420

ctatgcctca tcttcttgtt ggttcttctg gactatcaag gtatgttgcc cgtttgtcct      480

ctaattccag gatcatcaac maccagcacv ggaccatgca aracctgcac ractcctgct      540

caaggaacct ctatgtttcc ctcatgttgc tgtayaaaac ctayggaygg aaactgcacc      600

tgtattccca tcccatcatc ttgggctttc gcaaaatacc tatgggagtg ggcctcagtc      660

cgtttctctt ggctcagttt actagtgcca tttgttcagt ggttcgtagg gctttccccc      720

actgtctggc tttcagttat atggatgatg tggtwttggg ggccaagtct gtacaacatc      780

ttgagtccct ttatgccgct gttaccaatt ttcttttgtc tttgggyata catttaaacc      840

ctmasaaaac aaaamgatgg ggmtaytccc ttaacttcat gggrtatgta attggragtt      900

ggggsacmtk rccmcargaw catattgtry wraamwtcaa acwrtgtttt agraaacttc      960

ctgtaaacag gcctattgat tggaaagtwt gtcaacgaat tgtgggtctw ttgggrtttg     1020

cygcyccttt yacrcaatgt ggatatcctg ctytaatgcc tttatatgca tgtatacaag     1080

cwaaacaggc ttttacttty tcgccaackt ayaaggcctt tctmmryaaa cartatmtga     1140

mcctttaccc cgttgctcgg caacggccwg gtctgtgcca agtgtttgct gacgcaaccc     1200

ccactggytg gggcttggcs ataggccatc agcgcatgcg tggraccttt stgtctcctc     1260

tgccgatcca tactgcggaa ctcctagcmg cttgttttgc tcgcagcagg tctggrgcaa     1320

amctyatcgg gacygacaat tctgtcgtmc tytcccgcaa rtatacatcr tttccatggc     1380

tgctaggctg tgctgccaac tggatcctgc gcgggacgtc ctttgtytac gtcccgtcgg     1440

cgctgaatcc cgcggacgac ccctcscggg gccgcttggg gctctaccgc ccgcttctcc     1500

gyctgyysta ccgwccgacc acggggcgca cctctcttta cgcggactcc ccgtctgtgc     1560

cttctcatct gccggaccgt gtgcacttcg cttcacctct gcacgtcgca tggagaccac     1620

cgtgaacgcc caymggaacc tgcccaaggt cttgcataag aggactcttg gactttcagc     1680

aatgtcaacg accgaccttg aggcatactt caaagactgt gtgtttamtg agtgggagga     1740

gytgggggag gagrtyaggt taaaggtctt tgtactmgga ggctgtaggc ataaattggt     1800

stgttcacca gcaccatgca actttttcac ctctgcctar tcatctcwtg ttcatgtcct     1860

actgttcaag cctccaagct gtgccttggg tggctttggg gcatggacat tgacmcstat     1920

aaagaatttg gagctwctgt ggagttactc tcttttttgc cttctgactt ctttccktck     1980

rtkcgrgayc tyctmgayac cgyctctgct ctgtatcggg argccttara rtctcckgar     2040

cattgytcac ctcaccayac rgcactcagg caagctatts tgtgytgggg kgarttratg     2100

amtctagcya cctgggtggg wartaatttg gaagayccak cmtccmggga wytagtagtc     2160

arytatgtya ayrytaayat gggcmtaaar atcagrcaac tatkgtggtt tcacatttcc     2220

tgtctyactt ttggragaga aactgttctk gaatatttgg trtcttttgg agtgtggatt     2280

cgcacwcctc cwgcmtayag accaccaaat gcccctatct tatcaacact tccggaaact     2340

actgttgtta gacgamgagg caggtcccct agaagaagaa ctccctcgcc tcgcagacga     2400

aggtctcaat crccgcgtcg cagaagatct caatctcggg aatcymaatg ttagtatycc     2460

ttggacwcat aaggtgggaa actttacggg gctttattct tctacdgtac ctdkctttaa     2520

tcctvaakgg caaactcctt cwtttccwga yattcatttr caggaggaca tyrttgatar     2580

rtgtaarcaa tttgtgggrc cccttacagt raatgaaaac aggagactaa aattratwat     2640

gcctgctagr ttytatccca atgttacyaa atatttgccc ttagataaag gdatyaaacc     2700

ktattatcca gagyatgtag ttratcatta cttccagack mgacattatt trcayactct     2760

ttggaaggcg ggkatyttat ataaaagaga gwcmacacrt agcgcctcat tttgcgggtc     2820

accwtattct tgggaacaag akctacagca tgggaggttg gtcytccaaa cctcgaaaag     2880

gcatggggac aaatctttcy gtccccaatc cyctgggatt cttycccgat caycagttgg     2940

accctgcatt caaagccaac tcmgamaatc cmgattggga cctcaacccr cacaaggaca     3000

actggccgga ckccmacaag gtgggagtgg gagcattcgg gccrggrttc acyccwcccc     3060

atgggggact gttggggtgg agccctcarg ctcagggcmt actcacawct gtgccarcag     3120

ckcctcctcc tgcctccacc aatcggcagt yaggamggma gcctactccc ytrtctccac     3180

ctctaagrga cactcatcct caggcmrtgc agtggaa                              3217


<210>  5
<211>  3341
<212>  DNA
<213>  Hepatitis B Virus- Genotype C: Consensus DNA Sequence

<400>  5
ctccacmaca ttccaccaag ctctgctasa ycccagagtr aggggcctat aytttcctgc       60

tggtggctcc agttccggaa cagtaaaccc tgttccgact actgcctcwc ccatatcgtc      120

aatcttctcg aggactgggg accctgcacc gaacatggag arcacaacat caggattcct      180

aggacccctg ctcgtgttac aggcggggtt tttcttgttg acaagaatcc tcacaatacc      240

acagagtcta gactcgtggt ggacttctct caattttcta gggggagcac ccacgtgtcc      300

tggccaaaat tcgcagtccc caacctccaa tcactcacca acctcttgtc ctccaayttg      360

tcctggytat cgctggatgt gtctgcggcg ttttatcata ttcctcttca tcctgctgct      420

atgcctcatc ttcttgttgg ttcttctgga ctaccaaggt atgttgcccg tttgtcctct      480

acttccagga acatcaacta ccagcacggg accatgcarr acctgcacga ttcctgctca      540

aggmacctct atgtttccct cttgttgctg tacaaaacct tcggacggaa actgcacttg      600

tattcccatc ccatcatcct gggctttcgc aagattccta tgggagtggg cctcagtccg      660

tttctcctgg ctcagtttac tagtgccatt tgttcagtgg ttcgyagggc tttcccccac      720

tgtttggctt tcagytatat ggatgatgtg gtattggggg ccaagtctgt acaacatctt      780

gagtcccttt ttacckctrt taccaatttt cttttgtctt tgggtataca tttgaaccct      840

aataaaacca aacgttgggg ytactccctt aacttcatgg gatatgtaat tggaagttgg      900

ggtactttac crcargamca tattgtaywa aaamtcaagc aatgttttcg aaaaytgcct      960

gtaaatagac ctattgattg gaaagtatgt caragaattg tgggtctttt gggctttgct     1020

gcccctttta cacaatgtgg ctatcctgcc ttratgcctt trtatgcatg tatacaatct     1080

aagcaggctt tcactttctc gccaacttay aaggcctttc tgtgtmaaca atayctrmac     1140

ctttaccccg ttgcccggca acggtcaggt ctctgccaag tgtttgctga cgcaaccccc     1200

ackggwtggg gcttggcyat wggccatcgs cgcatgcgtg gaacctttgt ggytcctctg     1260

ccgatccata ctgcggaact cctagcagct tgttttgctc gcrrccggtc tggagcraaa     1320

ctkatcggra cbgacaactc dgttgtyctc tctcggaaat acacctcctt yccatggctg     1380

ctmggstgtg ctgccaactg gatcctgcgc gggacgtcct ttgtytacgt cccgtcggcg     1440

ctgaatcccg cggacgaccc rtctcggggc cgtttgggyc tctaccgtcc cytkcttymt     1500

ctgccgttcc rgccgaccac ggggcgcacc tctctttacg cggtctcccc gtctgtgcct     1560

tctcatctgc cggaccgtgt gcacttcgct tcacctctgc acgtmgcatg gagaccaccg     1620

tgaacgscca ccaggtcttg cccaagstct tayayaagag gactcttgga ctctcagcaa     1680

tgtcaacrac cgaccttgag gcatacttca aagactgttt gtttaargac tgggaggagt     1740

tgggggagga gattaggtta awgrtctttg tactaggagg ctgtaggcat aaattggtct     1800

gttcaccagc accatgcaac tttttcmcct ctgcctaatc atctcatgtt catgtcctac     1860

tgttcaagcc tccaagctgt gccttgggtg gctttrggrc atggacattg acccrtataa     1920

agaatttgga gcttctgtgg agttactctc ttttttgcct tctgacttyt ttccttctat     1980

tcgagatctc ctcgacaccg cctctgctct gtatcgggag gccttagagt ctccggaaca     2040

ttgttcacct caccatacag cactcagrca agcyattctg tgttggggtg agttgatgaa     2100

tytggccacc tgggtgggaa gtaatttgga agacccagca tccagggaat tagtagtcag     2160

ctatgtcaat gttaatatgg gcctaaaaat yagacaacta ytgtggtttc ayatttcctg     2220

ycttactttt ggaagagaaa ctgtycttga gtatttggtg tcttttggag tgtggattcg     2280

cactcctccy gcttacagac caycaaatgc ccctatctta tcaacacttc cggaaactac     2340

tgttgttaga cgacgaggca ggtcccctag aagaagaact ccctcgcctc gcagacgaag     2400

gtctcaatcg ccgcgtcgca gaagatctca atctcgggaa yctcaatgtt agtatccctt     2460

ggactcataa ggtgggaaac tttactgggc tttattcttc tactgtacct gtcyttaatc     2520

ctgaktssma aactccctcy tttcctmaya ttcatttrca ggaggacatt attaatagat     2580

gtcaacaata tgtgggccct ctkacagtta atgaaaaaag gagattaaaa ttaattatgc     2640

ctgctaggtt ctatcctaac cttaccaaat atttgccctt ggayaaaggc attaaaccdt     2700

attatcckga ayatgcagtt aatcattact tcaaaactag gcattattta catactctgt     2760

ggaaggctgg cattctatat aaragagaaa ctacacgcag cgcytcattt tgtgggtcac     2820

catattcttg ggaacaagag ctacrgcatg ggaggttggt cttccaaacc tcgacaaggc     2880

atggggacra atctttctgt tcccaatcct ctgggattct ttcccgatca ccagttggac     2940

cctgcgttcg gagccaactc aaacaatcca gattgggact tcaaccccaa caaggatcac     3000

tggccagagg caawymaggt aggagcggga gmmttyggkc cagggttcac cccaccacac     3060

ggmggycttt tggggtggag ccctcaggct cagggcayat tgacaacast gccagyagcr     3120

cctcctcctg yytccaccaa tcggcagtca ggaagacagc ctactcccat ctctccacct     3180

ctaagagaca gtcatcctca ggccatgcag tggaactcca caacattcca ccaagctctg     3240

ctagatccca gagtgagggg cctatatttt cctgctggtg gctccagttc cggaacagta     3300

aaccctgttc cgactactgt ctcacccata tcgtcaatct t                         3341


<210>  6
<211>  3182
<212>  DNA
<213>  Hepatitis B Virus- Genotype D: Consensus DNA Sequence

<400>  6
aactccacaa ccttccamca mactctgcaa gatcccagag tgaraggcct gtatytccct       60

gctggtggct ccagttcagg aacagtaaac cctgttcyga cyactgyctc tcccwtatcg      120

tcaatctyck cgaggaytgg ggaccctgcr ctgaacatgg agaacatcac atcaggattc      180

ctaggacccc tkctcgtgtt acaggcgggg tttttcttgt tgacaaraat cctcacaata      240

ccgmagagtc tagactcgtg gtggacttct ctcaattttc tagggggaac yaccgtgtgt      300

cttggccaaa attcgcagtc cccaacctcc aatcactcac caacctcytg tcctccaact      360

tgtcctggtt atcgctggat gtgtctgcgg cgttttatca tcttcctctt catcctgctg      420

ctatgcctca tcttcttgtt ggttcttctg gactatcaag gtatgttgcc cgtttgtcct      480

ctrattccag gatcytcaac maccagcacg ggaccatgcm gmacctgcac gactcctgct      540

caaggaacct ctatgtatcc ctcctgttgc tgtaccaaac cttcggacgg aaattgcacc      600

tgtattccca tcccatcatc ytgggctttc ggaaaattcc tatgggagtg ggcctcagcc      660

cgtttctcct ggctcagttt actagtgcca tttgttcagt ggttcgtagg gctttccccc      720

actgtttggc tttyagttat atggatgatg tggtattggg ggccaarwct gtwcascatc      780

ttgagtccct ttttaccgct gtwaccaatt ttcttytgtc tytgggtata catytaaacc      840

ctaacaaaac aaaragatgg ggttaytcyy tamayttyat gggbtayrtm attggawgty      900

rkggrwcbtt gccacaagaw cayatyrtac araaratcaa agaatgtttt agraaacttc      960

ctrttaacag gcctattgat tggaaagtvt gkcaacgwat tgtgggtctt ttggghtttg     1020

ctgcyccwtt tacacaatgt ggwtaycctg cyttaatgcc yttgtatgcm tgtathcaak     1080

ctaarcaggc tttcactttc tcgycaactt acaaggcctt tctrwgtaaa cartacmtga     1140

acctttaccc cgttgcycgg caacgsccwg gtctgtgcca agtgtttgct gacgcaaccc     1200

ccactggytg gggcttggym atrggcmatc agcgcatgcg tggaaccwtt swggctcctc     1260

tgccgatcca tactgcggaa ctcctagccg cttgttttgc tcgcagcmgg tctggrgcaa     1320

asmtymtcgg rackgayaay tctgttgtyc tctcscgsaa atatacrtcg tttccatggc     1380

tgctaggytg trctgccaac tggatcctkc gcgggacgtc ctttgtttac gtcccgtcgg     1440

cgctgaatcc cgcggacgac ccytctcggg gycgcttggg actytctcgt ccccttctcc     1500

gtctgccgtt ycrrccgacc acggggcgca cctctcttta cgcggwctcc ccgtctgtgc     1560

cttctcatct gccggwccgw gtgcacttmg sttcacctct gcacrtygca tggagaccac     1620

cgtgaacgcc caycarwtyw tgcccaaggt yttacataag aggactcttg gactyycwgy     1680

aatgtcaacg accgaccttg aggcmtactt caaagactgt ktgtttaarg actgggagga     1740

gyygggggag gagattwgrt taawgrtctt tgtaytagga ggctgtaggc ataaattggt     1800

ctgcgcacca gcaccatgcr actttttcac ctctgcctaa tcatctcttg ttcatgtcct     1860

actgttcaag cctcyaagct gtgccttrgg tggctttagg rcatggacat tgayccttat     1920

aaasaatttg gagctwctgt ggagttactc ycgtwtytgc cttctgactt ctttcyytmm     1980

gtacgagatc tyctagatac cgcctcagct ctrtatcggg aagccttaga rtctcctgag     2040

caytgtwcac ctcaccatac tgcactcagg caagcaattc tytgctgggg ggahctaatr     2100

actctakcya cctgggtggg tgktaatttg gaagatccar catctagrga cytagtagty     2160

agttatgtya acactaatat gggcctaaag ttcaggcaac thttgtggtt tcacrtttct     2220

tgtctcactt ttggaagaga aacrgtyrta gagtatttgg tgtctttygg agtgtggatt     2280

cgcactcctc cagcttatag accaccaaat gcccctatcy tatcaacact tccggagact     2340

actgttgtta sacgacgakg caggtcccct agaagaagaa ctccctcgcc tsscagacsa     2400

aggtctcaat cgccrcgtcg cagaagawct caatctcggg aatctcaatg ttagtattcc     2460

ytggactcat aaggtgggra actttackgg gctttattct tctactgtwc ctgtctttaa     2520

ycctcattgg aaaacaccht cttttcctaa tatacattta caccaagaca ttatcaaaaa     2580

atgtgaacar tttgtaggcc cactcacagt yaatgagaaa agaagaytgc aattgattat     2640

gcctgctagg ttttatccaa akgtyaccaa atatttrcca ttggataagg gtattaaacc     2700

ttattatcca garcatctag ttaatcatta cttccaaacy agacaytatt tacacactct     2760

atggaaggcg ggtrtattat ataagagaga aacwacacat agcgcctcat tttgtgggtc     2820

accatattcy tgggaacaag akctacagca tggggcagaa tctttccacc agcaatcctc     2880

tgggattctt tcccgaccac cagttggatc cagccttcag agcaaacacy gcaaatccag     2940

attgggactt caatcccaac aaggacwcct ggccagaygc caacaaggta ggagctggag     3000

cattcgggct gggwttcacc ccaccgcacg gaggyctttt gggrtggagc cctcaggctc     3060

agggcatact acwwacyktg ccagcaaatc cgcctcctgc ctcyaccaat cgccagtcag     3120

gmaggcarcc tacccckctg wctccacctt tgagaaacac tcatcctcag gccatgcagt     3180

gg                                                                    3182


<210>  7
<211>  3212
<212>  DNA
<213>  Hepatitis B Virus- Genotype E: Consensus DNA Sequence

<400>  7
ttccacaaca ttycaccaag ctctgcagga tcccagagta agaggcctgt attttcctgc       60

tggtggctcc agttccggaa cagtgaaccc tgttccgact actgcctcac tcatctcgtc      120

aatcttctcg aggattgggg accctgcacc gaacatggaa agcatcacat caggattcct      180

aggacccctg ctcgtrttac aggcggggtt tttcttgttg acaaaaatcc tcacaatacc      240

gcagagtcta gactcgtggt ggacttctct caattttcta gggggagctc ccgtgtgtct      300

tggccaaaat tcgcagtccc caacctccar tcactcacca acctcttgtc ctccaatttg      360

tcctggctat cgctggatgt gtctgcggcg ttttatcatc ttcctcttca tcctgctgct      420

atgcctcatc ttcttgttgg ttcttctgga ctatcaaggt atgttgcccg tttgtcctct      480

aattccagga tcatcaacca ccagtacggg accctgccga acctgcacga ctcttgctca      540

aggaacctct atgtttccct catgttgctg ttcaaaacct tcggacggaa attgcacttg      600

tattcccatc ccatcatcat gggctttcgg aaaattccta tgggagtggg cctcagcccg      660

tttctcctgg ctcagtttac tagtgccatt tgttcagtgg ttcgccgggc tttcccccac      720

tgtctggctt tcagttatat ggatgatgtg gtattggggg ccaagtctgt acaacatctt      780

gagtcccttt atacckctgt taccaatttt cttttgtctt tgggtataca tttaaatccc      840

aacaaaacaa aaagatgggg mtattccctk aatttcatgg gttatgtaat tggaagttgg      900

ggmtcattac cacaggaaca catcatamwr aaaatcaaag actgttttag aaaactcccy      960

gttaaccggc ctattgattg gaaagtatgt caamgaattg tgggtctttt gggctttgct     1020

gccccyttta cacaatgtgg rtatcctgct ttaatgcctc tgtatgcrtg taytcaatct     1080

aagcaggctt tcactttctc gccaacttac aaggcctttc tgtgtaaaca atacctgaac     1140

ctttaccccg ttgcccggca acggccaggt ctgtgccaag tgtttgctga tgcaaccccc     1200

actggctggg gcttggccat aggcmwtcag cgcatgcgcg gaacctttrt ggctcctctg     1260

ccgatccata ctgcggaact cctagccgct tgttttgctc gcagcaggtc tggagcraaa     1320

cttatcggga cmgataattc tgtcgttctc tcccggaart atacatcctt tccatggctg     1380

ctaggctgtg ctgccaactg gatcctgcga gggacgtcct ttgtctacgt cccgtcagcg     1440

ctgaatcctg cggacgaccc gtctcggggt cgcttgggga tctatcgtcc ccttctccgt     1500

ctgccgttcc agccgwccac ggggcgcacc tctctttacg cggtctcccc gtctgtkcct     1560

tctcatctgc cggaccgtgt gcacttcgct tcacctctgc acgtcgcatg gagaccaccg     1620

tgaacgccca ccaaatmttg cccaaggtct tacataagag gactcttgga ctctctgcaa     1680

tgtcaacgac cgaccttgag gcatacttca aagactgttt gtttaaagac tgggaggagt     1740

ygggggagga gattagatta aaggtctttg tactaggagg ctgtaggcat aaattggtct     1800

gcgcaccagc accatgcaac tttttcacct ctgcctaatc atctcttgtt catgtcctac     1860

tgttcaagcc tccaagctgt gccttgggtg gctttggggc atggacattg acccttataa     1920

agaatttgga gctactgtgg agttactctc gtttttgcct tctgacttct ttccttcagt     1980

aagagatctt ctagataccg cctcagctyt gtatcgggat gccttagart ctcctgagca     2040

ttgttcacck caycacactg cactcaggca agccattctt tgctggggrg aactaatgac     2100

tctagctacc tgggtgggtg taaatttgga agatccagca tccagggacc tagtagtcag     2160

ttatgtcaat actaatatgg gcctaaagtt caggcaatta ttgtggtttc acatttcttg     2220

tctcactttt ggaagagaaa ccgtcataga gtatttggtg tcttttggag tgtggattcg     2280

cactcctcca gcttatagac caccaaatgc ccctatctta tcaacacttc cggagaatac     2340

tgttgttaga cgaagaggca ggtcccctag aagaagaact ccctcgcctc gcagacgaag     2400

atctcaatcg ccgcgtcgca gaagatctca atctccagct tcccaatgtt agtattcctt     2460

ggactcayaa ggtgggaaat tttacggggc tttactcttc tactatacct gtctttaatc     2520

ctaactggaa aactccatct tttcctgata ttcatttgca ccaggacatt attaacaaat     2580

gtgaacaatt tgtaggtcct ctaacwgtaa atgaaaaacg aagattaaac ttagtcatgc     2640

ctgctagatt ttttcccatc tctacgaaat atttgcccct agagaaaggt ataaaacctt     2700

attatccaga taatgtagtt aatcattact tccaaaccag acactattta cayaccctat     2760

ggaaggcggg catcttatat aaaagagaaa ctacacgtag cgcctcattt tgtgggtcac     2820

cttattcttg ggaacaagag ctacatcatg gggctttctt ggacggtccc tctcgaatgg     2880

gggaagaatm wttccaccac caatcctctg ggattttttc ccgaccacca gttggatcca     2940

gcattcagag caaacaccag aaatccagat tgggaccaca atcccaacaa agaccactgg     3000

acrgaagcca acaaggtagg agtgggagca ttcgggcckg ggttcactcc cccacacgga     3060

ggccttttgg ggtggagccc tcaggctcaa ggcatgctaa aaacattgcc agcagatccg     3120

cctcctgcct ccaccaatcg gcagtcagga aggcagccta ccccaatcac tccacctttg     3180

agagacactc atcctcaggc catgcagtgg aa                                   3212


<210>  8
<211>  3215
<212>  DNA
<213>  Hepatitis B Virus- Genotype F: Consensus DNA Sequence

<400>  8
ctcaacycag ttccaccarg cyytgttgga tccsagggta agggctctgt ayttycctgc       60

tggtggctcc agttcagrga crcagaaccc tgctccgact attgcctctc tcacatcatc      120

aaycttctcg aagactgggg gccctgcyat gaacatggas arcatyacat caggactcct      180

aggacccctg ctcgtgttac aggcggtgtg tttcttgttg acaaaaatcc tcacaatacc      240

acagagtcta gactcgtggt ggacttctct caattttcta gggggactac ccgggtgtcc      300

tggccaaaat tcgcagtccc caacctccaa tcacttacca acctcctgtc ctccaacttg      360

tcctggctat cgttggatgt gtctgcggcg ttttatcatc ttcctcttca tcctgctgct      420

atgcctcatc ttcttgttgg ttcttctgga ctaycaaggt atgttgcccg tttgtcctct      480

amttccagga tcyacgacca ccagcacggg accmtgcaaa acctgcacaa ctcttgcwca      540

aggaacctct atgtttccct cctgttgctg ttccaaaccc tcggacggaa actgcacytg      600

tattcccatc ccatcatcyt gggctttagg aaaataccta tgggagtggg cctcagcccg      660

tttctcctgg ctcagtttac tagtgcaatt tgttcagtgg tgcgtmgggc tttcccccac      720

tgtytggctt ttagttatat ggatgatctg gtattggggg ccaaatctgt gcagcatctt      780

gagtcccttt ataccgctgt taccaatttt ctgttatctg tgggtatcca tttraatacy      840

kctaaaacaa aaagatgggg ttacwmyyta catttyatgg gttatgthat tggyagttgg      900

ggadcrttac cccaagayca yattrtacac aaaatcaarg awtgytttmg raaactkcct      960

gtaaatcgtc caattgaytg gaaagtttgt caacgyatwg tgggwctttt gggctttgck     1020

gcycctttya cccaatgygg ttatcctgct ctcatgccty tgtatrcctg tatyactgck     1080

aaacaggctt ttgtcttytc gccaacytac aaggcctttc tstgtaaaca rtacatgaac     1140

ctttacccsg ttgctcggca acggccaggc ctgtgccaag tgtttgctga cgcaaccccc     1200

actggttggg gcttggccat tggccatcag cgcatgcgtg gaacctttgt ggctcctctg     1260

ccgatccata ctgcggaact cctwgcagcy tgtttcgctc gcagcmggtc tggagcgamy     1320

mtyatcggba crgacaaytc tgttgtmctc tctaggaagt acacctcctt yccatggctg     1380

ctcggwtgtg ctgcmaactg gatcctgcgc gggacgtcct ttgtttacgt cccrtcggcg     1440

ctgaatcccg cggacgaccc ctcccggggy cgcttggggc tstaccgccc ycttctbcgt     1500

ctgccgttcc agccgacsac gggtcgcacc tctctttacg cggactcccc gtctgttcct     1560

tctcatctgc cggwccgtgt gcacttcgct tcacctctgc acgtcgcatg gagaccaccg     1620

tgaacgcccc ctggartytg ccaacagtct tacataarmg gactmttgga ctttcaggay     1680

ggtcaatgac ctggatcgaa gamtacatca aagactgtgt atttaargac tgggaggagy     1740

tgggggagga gatyaggtta aaggtctttg taytaggagg ctgtaggcat aaattggtct     1800

gttcaccagc accatgcaac tttttcacct ctgcctaatc atcttttgtt catgtccyac     1860

tgttcaagcc tccaagctgt gccttgggtg gctttggggc atggacattg acccttataa     1920

agaatttgga gcttctgtgg arttrctctc ktttttgcct tctgatttct tcccrtckgt     1980

tcgggaccta ctcgacaccg cttcagcyct btacmgggat gctytagagt cacckgaaca     2040

ttgcacyccc aaycatacyg ctctcaggca agctattttg tgytggggtg arttaatgac     2100

tttggcttcc tgggtgggya ataatttgga rgaccctgca gcyagggatt tagtagttaa     2160

ytatgtyaac actaayatgg gcytraarat tagacaaytr ttgtggtttc acatttcctg     2220

ycttactttt ggaagagaaa cagttctwga gtatttggts tcctttggag tgtggattcg     2280

cactccwccw gcttayagac caccaaatgc ccctatccta tccacacttc cggaaactac     2340

tgttgttaga cgacgaggca ggtcccctag aagaagaact ccctcgcctc gcmgacgaag     2400

rtctcaatcg ccgcgtcgcm gmagatctca atctccagct tcccaatgtt agtattcctt     2460

ggactcataa ggtgggaaay tttacggggc tytactcttc tactgtrcct gctttyaatc     2520

ctmactggty mactccttct tttcctgata ttcatttrca ycargayctg atwtctaaat     2580

gtgaacaatt tgtaggcccr ctyacyaaaa atgaattrmg aagrttraaa ttgrtyatgc     2640

cagcyagatt ytwtcctaar sttacyaaat aytttccymt ggakaaaggs atyaaaccyt     2700

attatcctga gcatgcagtt aatcattayt ttaaracmag acattatttg catactttat     2760

ggaaggcggg aatyttatat aagagagaat ccacacgtag cgcctcattt tgtgggtcac     2820

catattcctg ggaacaagag ctacagcatg ggagcacctc tctcaacgac amgaagrggc     2880

atgggacwga atctytctgt gcccaatccw ctgggmttct tkccagamca tcagctggat     2940

cckctwttca gagcaaattc cagcagtccc gaytgggact tcaacamaaa caaggacast     3000

tggccaatgg caaacaaggt aggagtggga ggytacggtc cagggttcac acccccwcac     3060

ggtggcctgy tggggtggag ccctcargca carggtgtky taacaacctt gccagcagat     3120

ccgcctcctg cttccaccaa tcggcggtcc gggagraagc caaccccagt ctctccacct     3180

ctaagagaca cacatccaca ggcmatgcag tggaa                                3215


<210>  9
<211>  3248
<212>  DNA
<213>  Hepatitis B Virus- Genotype G: Consensus DNA Sequence

<400>  9
ctctacagca ttccaccaag ctctacaaaa tcccaaagtc aggggcctgt attttcctgc       60

tggtggctcc agttcaggga tagtgaaccc tgttccgact attgcctctc acatctcgtc      120

aatcttctcc aggattgggg accctgcacc gaayatggag aacatcacat caggattcct      180

aggacccctg ctcgtgttac aggcggggtt tttcttgttg acaagaatcc tcacaatacc      240

rcagagtcta gactcgtggt ggacttctct caattttcta gggggagtgc ccgtgtgtcc      300

tggcctaaat tcgcagtccc caacctccaa tcactcacca atctcctgtc ctccaacttg      360

tcctggctat cgctggatgt gtctgcggcg ttttatcata ttcctcttca tcctgctgct      420

atgcctcatc ttcttgttgg ttcttctgga ctatcaaggt atgttgcccg tttgtcctct      480

gattccagga tcctcgacca ccagtacggg accctgcaaa acctgcacga ctcctgctca      540

aggcaactct atgtatccct catgttgctg tacaaaacct tcggacggaa attgcacctg      600

tattcccatc ccatcatctt gggctttcgc aaaataccta tgggagtggg cctcagtccg      660

tttctcttgg ctcagtttac tagtgccatt tgttcagtgg ttcgtagggc tttcccccac      720

tgtctggctt tcagctatat ggatgatgtg gtattggggg ccaaatctgt acaacatctt      780

gagtcccttt ataccgctgt taccaatttt cttttgtctt tgggtataca tctaaaccct      840

amcaaaacaa aaagatgggg ttattcctta aattttatgg gatatgtaat tggaagttgg      900

ggtactttgc cacaagaaca catcacacag aaaattaagc aatgttttcg gaaactccct      960

gttaacaggc caattgattg gaaagtctgt caacgaataa ctggtctgtt gggtttcgct     1020

gctcctttya cccaatgtgg ttaccctgcc ttaatgcctt tatatgcatg tatacaagct     1080

aagcaggctt ttactttctc gccaacttat aaggcctttc tctgtaaaca atacatgaac     1140

ctttaccccg ttgctaggca acggcccggt ctgtgccaag tgtttgctga cgcaaccccc     1200

actggttggg gcttggccat cggccatcag cgcatgcgtg gaacctttgt ggctcctctg     1260

ccgatccata ctgcggaact cctagctgct tgttttgctc gcagccggtc tggagcaaaa     1320

ctcattggga ctgacaattc tgtcgtcctt tctcggaaat atacatcctt tccatggctg     1380

ctaggctgtg ctgccaactg gatccttcgc gggacgtcct ttgtttacgt cccgtcagcg     1440

ctgaatccag cggacgaccc ctcccggggc cgtttggggc tctgtcgccc ccttctccgt     1500

ctgccgttcc tgccgaccac ggggcgcacc tctctttacg cggtctcccc gtctgtkcct     1560

tctcatctgc cggaccgtgt gcacttcgct tcacctctgc acgttacatg gaaaccgcca     1620

tgaacacctc tcatcatctg ccaaggcagt tatataagwg gactcttgga ctgtttgtta     1680

tgtcaacaac cggggtggag aaatacttca aggactgtgt ttttgctgag tgggaagaat     1740

taggcaatga gtccaggtta atgacctttg tattaggagg ctgtaggcat aaattggtct     1800

gcgcaccagc accatgtaac tttttcacct ctgcctaatc atctcttgtt catgtcctac     1860

tgttcaagcc tccaagctgt gccttgggtg gctttagggc atggatagaa caactttgcc     1920

atatggcctt tttggcttag acattgaccc ttataaagaa tttggagcta ctgtggagtt     1980

gctctcgttt ttgccttctg actttttccc gtctgttcgt gatcttctcg acaccgcttc     2040

agctttgtac cgggaatcct tagagtcctc tgatcattgt tcgcctcacc atacagcact     2100

caggcaagca atcctgtgct ggggtgagtt gatgactcta gcyacctggg tgggtaataa     2160

tttggaagat ccagcatcca gagatttggt ggtcaattat gttaatacta atatgggttt     2220

aaaaatcagg caactattgt ggtttcacat ttcctgtctt acttttggga gagaaaccgt     2280

tcttgagtat ttggtgtctt ttggagtgtg gattcgcact cctcctgctt atagaccacc     2340

aaatgcccct atcctatcaa cacttccgga gactactgtt gttagacgaa gaggcaggtc     2400

ccctcgaaga agaactccct cgcctcgcag acgaagatct caatcgccgc gtcgcagaag     2460

atctgcatct ccagcttccc aatgttagta ttccttggac tcacaaggtg ggaaacttta     2520

cggggctgta ttcttctact atacctgtct ttaatcckga ttggcaaact ccttcttttc     2580

caaatatcca tttgcatcaa gacattataa ctaaatgtga acaatttgtg ggccctctca     2640

cagtaaatga gaaacgaaga ttaaaactag ttatgcctgc cagatttttc ccaaactcta     2700

ctaaatattt accattagac aaaggtatca aaccgtatta tccagaaaat gtagttaatc     2760

attacttcca gaccagacat tatttacata ccctttggaa ggcgggtatt ctatataaga     2820

gagaaacatc ccgtagcgct tcattttgtg ggtcaccata tacttgggaa caagatctac     2880

agcatggggc tttcttggac ggtccctctc gagtggggaa agaacctttc crccagcaat     2940

cctctaggat tccttcccga tcaccagttg gacccagcat tcagagcaaa taccaacaat     3000

ccagattggg acttcaatcc caaaaaggac ccttggccag aggccaacaa ggtaggagtt     3060

ggagcctatg gacccgggtt cacccctcca cacggaggcc ttttggggtg gagccctcag     3120

tctcagggca cactaacaac tttgccagca gatccgcctc ctgcctccac caatcgtcag     3180

tcagggaggc agcctactcc catctctcca ccactaagag acagtcatcc tcaggccmtg     3240

cagtggaa                                                              3248


<210>  10
<211>  3215
<212>  DNA
<213>  Hepatitis B Virus- Genotype H: Consensus DNA Sequence

<400>  10
gaactcaaca cagttccacc aagcactgtt ggatccgaga gtmaggggtc tgtatyttcc       60

tgctggtggc tccagttcag aaacacagaa ccctgytccg actattgcct ctctcacatc      120

atcaatcttc tcgaagactg gggaccctgc tatgaacatg gagaacatca catcaggact      180

cctargaccc cttctcgtgt tacaggcggt gtgtttcttg ttgacaaaaa tcctcacaat      240

accacagagt ctagactcgt ggtggacttc tctcaatttt ctaggggtac cacccgggtg      300

tcctggccaa aattcgcagt ccccaatctc caatcactta ccaacctcct gtcctccaac      360

ttgtcctggc tatcgttgga tgtgtctgcg gcgttttatc atcttcctct tcatcctgct      420

gctatgcctc atcttcttgt tggttcttct ggactatcaa ggtatgttgc ccgtgtgtcc      480

tctacttcca ggatctacaa ccaccagcac gggwccctgc aaaacctgca ccactcttgc      540

tcaaggaacc tctatgtttc cctcytgctg ctgtaccaaa ccttcggacg gaaattgcac      600

ctgtattccc atcccatcat cttgggcttt cggaaaatac ctatgggagt gggcctcagc      660

ccgtttctct tggctcagtt tactagtgca atttgttcag tggtgcgtag ggctttcccc      720

cactgtctgg cttttagtta tatggatgat ttggtattgg gggccaaatc tgtgcagcat      780

cttgagtccc tttataccgc tgttaccaat tttttgttat ctgtgggcat ccatttraac      840

acagctaaaa caaaatggtg gggttattcc ttacacttta tgggttatat mattgggagt      900

tgggggacmt tgcctcagga acatattgtg cawaaaatca aarattgctt tcgcaaactt      960

ccygtkaatm gacccattga ttggaargty tgtcaacgma ttgtgggtct tttgggcttt     1020

gcagcccctt ttactcaatg tggttatcct gctctcatgc ccttrtatgc ctgtattacc     1080

gctaarcagg cttttgtttt ctcgccaact tacaaggcct ttctctgtaa acaatacatg     1140

aacctttacc ccgttgctcg gcaacggcca ggcctttgcc aagtgtttgc tgacgcaacc     1200

cccactggct ggggcttggc gattggccat cagcgcatgc gcggaacctt tgtggctcct     1260

ctgccgatcc atactgcgga actcctagca gcttgtttcg ctcgcagcmg gtctggagcg     1320

gacattatcg gcactgacaa ctcygttgtc ctktctcgga agtacacctc cttcccatgg     1380

ctgctmggct gtgctgccaa ctggatcctg cgcgggacgt cctttgtyta cgtcccgtcg     1440

gcgctgaatc ctgcggacga cccctctcgt ggtcgcytgg ggctctgccg cccycttctc     1500

cgcctkccgt tccggccgac gacrggkcgc acctctcttt acgcggactc cccgcctgtg     1560

ccttytcatc wgccggcccg tgtgcacttc gsttcacctc tgcacgtcgc atggagacca     1620

ccgtgaacgc ccctyrrarc ttgccaacam ccttrcataa raggactctt ggwctttcrc     1680

cccggtcaac gacctggatt gaggaataca tcaaagactg tgtrtttaag gactgggagg     1740

agtcggggga ggagttgagg ttaaaggtct ttgtattagg aggctgtagg cataaattgg     1800

tctgttcacc agcaccatgc aactttttca cctctgccta atcatctttt gttcatgtcc     1860

cactgttcaa gcctccaagc tgtgccttgg gtggctttgg ggcatggaca ttgaccctta     1920

taaagaattt ggagcttctg tggagttact ctcatttttg ccttctgact tcttcccgtc     1980

tgtccgggac ctrctcgaca ccgcttcagc cctctaccga gatgccttag aatcwcccga     2040

acattgcacc cccaaccaya ctgctctcag gcaagctatt ytgtgctggg gtgagttrat     2100

gacyttggct tcctgggtgg gcaataattt agaggatcct gcrgcwagag atctagtagt     2160

taattatgtc aayactaaya tgggcctaaa aattagacaa ttaytatggt ttcayatttc     2220

ctgccttaca tttggaagag awactgtkct tgagtatttg gtgtcttttg gagtgtggat     2280

tcgcactcca cctgcttata gaccaccaaa tgcccctatc ctatcaacac ttccggagac     2340

tactgttgtt agacaacgag gcagggcccc tagaagaaga actccctcgc ctcgcagacg     2400

aagatctcaa tcaccgcgtc gcmgaagatc tcaatctcca gcttcccaat gttagtatyc     2460

cttggactca taaggtggga aactttaccg gtctttactc ctctactrta cctgttttya     2520

atcctgaytg gytaactccy tcttttcctg acattcacyt rcatcaagat ytgatacaaa     2580

aatgtgarca atttgtrsgc ccactcacta maaatgaark gagacgattg aaaytaatta     2640

tgccagcwag rttttatccc aaagytacta aatacttccc tttggataaa ggtattaarc     2700

cwtaytatcc agagmatgtg gttaatcatt acttcaaaac tasacaytat ttacatactt     2760

tgtggaaggc argaattcta tataagagag aatccacaca tagcgcctca ttttgtgggt     2820

caccatattc ctgggaacaa garctacagc atgggagcac ctctctcaac ggcgagaagg     2880

ggcatgggac agaayctytc tgtgcccaat cctctgggat tctttccaga ccaccagttg     2940

gatccactat tcagagcaaa ttccagcagt cccgattggg acttcaacac aaacaaggac     3000

aattggccaa tggcaaacaa ggtaggagtg ggaggcttyg gtccagggtt cacaccccca     3060

cacggtggcc ttctggggtg gagccctcag gcacagggca ttctgacaac ctcgccaccm     3120

gatccacctc cygcttccac caatcggagg tcaggaagra arccaacccc agtctctcca     3180

cctctaaggg acacacatcc acaggccatg cagtg                                3215


<210>  11
<211>  9953
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype B: Consensus DNA Sequence


<220>
<221>  misc_feature
<222>  (5477)..(5477)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6379)..(6379)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6688)..(6688)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6741)..(6741)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6813)..(6813)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (7189)..(7189)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (7892)..(7892)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (9023)..(9023)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (9896)..(9896)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (9924)..(9924)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (9932)..(9932)
<223>  n is a, c, g, or t

<400>  11
tggaagggct aattcactcc caacgaagac aagatatcct tgatctgtgg atctaccaca       60

cacaaggcta cttccctgat tagcagaact acacaccagg gccagggatc agatatccac      120

tgacctttgg atggtgctac aagctagtac cagttgagcc agagaagtta gaagaagcca      180

acaaaggaga gaacaccagc ttgttacacc ctgtgagcct gcatggaatg gatgacccgg      240

agagagaagt gttagagtgg aggtttgaca gccgcctagc atttcatcac atggcccgag      300

agctgcatcc ggagtacttc aagaactgct gacatcgagc ttgctacaag ggactttccg      360

ctggggactt tccagggagg cgtggcctgg gcgggactgg ggagtggcga gccctcagat      420

cctgcatata agcagctgct ttttgcctgt actgggtctc tctggttaga ccagatctga      480

gcctgggagc tctctggcta rctrgggaac ccactgctta agcctcaata aagcttgcyk      540

ksmgygswty magtagtgtg tgcccgtctg ttrtgtgact ctggtarcta gagatccctc      600

agaccctttt agtyagygtr gaaaatctct agcagtggcg cccgaacagg gacbygaaag      660

cgaaagdraa accagagrag mtctctcgac gcaggactcg gcttgctgaa gaagaagcgc      720

gcrcggcaag aggcgagggg cggcgactgg tgagtacgcc tawaaatttt gactagcgga      780

ggctagaagg agagagatgg gtgcgagagc gtcartatta agcgggggav aattagatms      840

atgggaraaa attcggttam ggccaggrgg aaagaaaara tatarrytaa aacatwtagt      900

atgggcaagc agrgagctag aacgattygc astyaaycct ggcctdttrg aracakcaga      960

aggctgtaga caawtaytgr sacagctaca rccadsyctt caracaggat cagaagaact     1020

taratcakta twtaatacar tagcarycct ctattgtgtr catsmaarga tagakrtaar     1080

agacaccaar gargctttag avaarataga ggaagarcaa aacaaawgya agaaamrrgc     1140

acagcaagca cagcaagcwr magctgacrc agramamarc arycmggtya gccaraatta     1200

ccctatagtg caraaymtbc argggcaaat ggtacatcar gcmatatcac ctagaacttt     1260

aaatgcatgg gtraaagtar tagragaraa ggcyttyagc ccagargtra taccyatgtt     1320

tkcagcrtta tcagaaggag ccaccccaca agatttaaay accatgctaa acacagtggg     1380

ggggacatca agcagccatg caaatgttaa aagaraccat caatgaggaa gctgcagaat     1440

gggatagadt rcatccagyg cawgcmgggc ctathgcacc aggccagatr agagamccaa     1500

ggggaagtga catagcagga actactagta cccttcagga acaaatarsa tggatgacam     1560

ataatccacc tatcccagtr ggagaaatht ayaararatg gataatcmtg ggattaaata     1620

aaatagtaag ratgtatagy cctaccagca ttytrgacat aaracaagga ccaaaggaac     1680

cctttagrgr ytatgtagay cggttctata aractytaag agcygagcaa gcytcacagg     1740

adgtaaaaaa ttggatgaca gaaaccttgt tggtccaaaa ykcgaaccca gattgyaara     1800

ctatwttaaa agcattrgga ccagcrgcta cactagarga aatgatgacm gcatgtcagg     1860

gagtrggrgg wccyrgccay aargcragag ttttggckga rgcaatgagc cargtracaa     1920

rtkcavstrc cataatgatg cararaggca atywtagraa ccaamgaarg rytgttargt     1980

gtttcaattg tggcaaagwa ggrcacayag ccmraaattg cagggcycct aggaaraagg     2040

gctgttggar atgtggaarr gaaggacacc aaatgaaaga ttgtrmtsar agacaggcta     2100

attttttagg gaaratytgg ccttccyaca arggraggcc agggaatttt cttcagagca     2160

gaccagagcc racagcccck tctcagagca gaccagagcc aacagcccca ccagmagaga     2220

gcttcaggty tggggwrgrg acaacaactc ccyctcagar gcaggagmcr ayagacaagr     2280

aactrtatcc tttarctkcc ctcarrtcac tctttggcar cgacccmthg tcrcaataar     2340

gatagggggg carctaaagg aagctctatt agayacwggr gcagatgata cagtattaga     2400

agaaatgrrt ttrccmggaa gatggaaacc aaaaatgata gggggaattg gaggttttat     2460

caaagtaaga cartatgatc agrtacyyrt agaaatywgt ggamataaar ctataggtac     2520

agtrttarta ggacctacac ctrtcaacat aattggaaga aatytgttra ctcagmttgg     2580

ytgcactyta aattttccya ttagycctat tgaractgta ccagtaaart traagccagg     2640

aatggatggy ccaaragtya aacaatggcc attracagaa gaaaaaataa aagcattagy     2700

agaaatttgt rcagarmtgg aaaaggaagg raaaatttca aaaattgggc ctgaaaatcc     2760

atacaatact ccartatttg cyataaaraa raaagacagy actaaatgga gaaarttagt     2820

agatttyaga gaacttaata araraactca agacttctgg gaagttcaat taggaayacc     2880

acayccygcr gggttraaaa agaaaaaatc agtaacrgta ctggaygtgg gwgatgcata     2940

tttytcagtt cccttagatr ragamttcag raartatact gcatttacca tacckagtry     3000

aaacaaygag acaccaggga ttagatatca gtayaatgtg cttccacagg gatggaaagg     3060

atcaccagca atattccaaw gtagcatgac aaaaatytta gagccyttta gaaaacaaaa     3120

tccagamata gttatctatc aatacrtgga tgatttgtat gtaggatctg ayttagarat     3180

rgggcagcat agaacaaraa tagargarct ragacaacat ytgttrargy ggggayttrm     3240

cacaccagay aaaaaacatc agaaagaacc yccattcctt tggatgggkt atgaactcca     3300

tcctgataaa tggacagtac arcctatary rctgccrgar aargacvsct ggactgtcaa     3360

tgacatacag aagttagtgg graaattgaa ttgggcaagt cagatwtays cagggattaa     3420

agtaargcav ttatgtaaac tycttarrgg arcyaaagca ctaacagaar tartaccwct     3480

aacarmagar gcagarytag aaytrgcaga aaacagrgar attctaaaag aamcagtaca     3540

tggagtgtay tatgacccaw caaaagaytt aatagcagaa atacagaagc agggrcaagg     3600

ccaatggaca tatcaaattt atcaagagcc atttaaaaat ctraaracag gaaartatgc     3660

aarartgagg ggtrcccaca cwaatgatgt aaaacartta acagaggcag tgcaaaaaat     3720

arcyacagaa agcatagtaa tatggggmaa gactcctaaa ttyaraytrc ccatacaaaa     3780

rgaaacatgg gaadcatggt ggayrgakta ttggcaagcc acctggattc ctgagtggga     3840

rtttgtyaat acccctccct tagtgaaatt atggtaccag ttagaraarg arcccatagt     3900

aggagcagaa acyttctayg tagatggggc rgctaayagg garactaary taggaaaagc     3960

aggatatgtk acyrayagag gragacaaaa rgytrtchcy mtramkgaca caacaaatca     4020

raagactgag ttacaagcaa ttyayctagc wytgcargat tcrggaytag aagtaaayat     4080

agtaacagac tcacaatatg cattaggaat cattcaagca caaccagatm aragtgaatc     4140

agagwtagtc artcaaataa tagagsagtt aatamaaaag gaaarggtct ayctrrcatg     4200

ggtrccagca cacaarggaa ttggrggwaa tgaamaagta gataaattag tyagtdctgg     4260

ratcaggaaa gtactattty tagatggaat agataaggcc cargawgavc atgaraaata     4320

tcacartaat tggararcaa tggctagtga ttttaacctg ccacctrtrg tagcaaaaga     4380

aatagtagcc wgytgtrata aatgycarct aaaaggrgaa gccatgcatg gacargtaga     4440

ctgtagtcca ggaatatggc arytagaytg tacacattta gaaggaarar ttatcctrgt     4500

agcagttcat gtrgccagtg grtatataga agcagaagtk atyccagcag aracagggca     4560

rgaaacagca taytttctyt taaaaytagc aggaagatgg ccagtaaara cmatacatac     4620

wgacaatggc mscaayttca ycrgtrstrc rgtyarggcy gcctgttggt gggcrggrrt     4680

caagcaggaa tttggmatyc cctacaatcc ycaaagtcaa ggagtagtag aatctatraa     4740

taaagaatta aagaaaatta taggacaggt aagagakcag gctgaacatc tyaaracagc     4800

agtacaaatg gcagtattya tccacaattt taaargaara ggggggattg gggrstayag     4860

tgcaggggar agaatartag acataatagc aacagacata caracyaaag aaytacaaaa     4920

rcaaattaca aaaattcaaa attttcgggt ytattacagg gacagcagar ayccactttg     4980

gaaaggacca gcaaagctyc tstggaaagg tgaaggggca gtagtaatac aagataakag     5040

tgacataaaa gtagtrccaa gaagaaaagy aaaratcatt agggattatg gaaaacagat     5100

ggcaggtgat gattgtrtgg caagtagaca ggatgaggat taraacatgg aaaagtttag     5160

traaayacca tatgtatrkd tcarrgaaag ctarrrrmtg gttktataga catcactats     5220

aaagymytca tccaarrata agttcagaag tacayatccc actagrrgab gctrrmttrg     5280

tartaahrac atattggggt ctgcatacag grgaaagaga mtggcatttg ggycarggag     5340

tctccataga atggaggraa rrragatata vyacacaart agacccwgrm ctagcagacc     5400

aactaattca tvtrtattay tttgahtgtt ttwcagamtc tgcyataaga aakgcchtrt     5460

taggacrywk arttagncmt arktgtgaat atcaagcagg acayaacaag gtaggrtcyy     5520

tacartactt ggcmctarca gyaktaakaa maccaaarav rakaaagcca cctttgccya     5580

gtgtyrvgaa rctracrgag gayagatgga acaagycccr gmagaccaag ggccacagag     5640

rgagccayac aatgmatgga cactagarct tytagaggar cttaagartg aagctgtkag     5700

acaytttccy aggrbwtggc thcayrrmtt aggrcaayat atctatgaaa mttatgggga     5760

yacttggrya ggagtggarg ccmtaataag aatdctgcaa caactgctgt ttatycattt     5820

tcagrattgg rtgtcracat agcagaatag gcrttayycb acrrrggaga gyaagraatg     5880

gakccagtag aycctaract agagccctgg aagcatccag gaagtcagcc tarrackgct     5940

tgtamcamtt gctattgtaa aaartgttgc tttcattgcc aagtttgytt cayamvaaaa     6000

gscttaggca tctcctatgg caggaagaag cggagacagm gacgaagarc tsmtcmrrac     6060

hgtcmgaytv atcaagywtc tytaycaaag cagtragtar trymtgtaay gmmmbctwta     6120

hmwatmkyag saatagtagc attagtarta gyarbaatam tagcaatagt tgtgtggwcy     6180

atagtrwtmw tagaatatag raaaatatta aracaaarra aaatagayar gwtaattgat     6240

agrmtaakag amagagcaga agayagtggc aatgaragtg aaggrgahay aksarsamyt     6300

rtsrrswykb ggrtggagat ggggcaytac gctcaccwtg ctccttggra yrttratgat     6360

ywgtagwgct rcagaamant tgtgggtmac agtctaytat ggggtacctg tgtggarrga     6420

agcaammacy actctmtttt gtgcrtcaga tgctaaagcw tatgadacag argtacataa     6480

tgtttgggcc acacatgcct gtgtacccac agacccyaac ccacaagarv tagtattrgw     6540

raatgtgaca gaaaayttta ayryrtggrm aaatracatg gyagaacara tgcatgarga     6600

yataatcagt ttatgggats aaagyctaaa rccatgtgtr aaattaacyc cactctgtgt     6660

tastttaaak tgyamtgatt atttrrvnam yrhyactarw wmyamyavtr byrsygvyyc     6720

yamtamtagt accactrvdr ntrrhwysrm wmwkrhkrmr rgrgarwtra rwaactgctc     6780

tttcmakrtc ascacarvca tarrvrrtar rdnrmagara sartwtgcay tbttkwrtaa     6840

rcwtgatrta rtacmaatrr ataatratav twmyargact aataatagta aytwtadryt     6900

rayamrttgt aayasctcag tcattacmca ggcytgtcca aaggtrtcct ttsarccaat     6960

ycccatayat tattgtrccc crgctggktt ygcgattcta aartgtaawr ataarwmgtt     7020

yartggaamv ggasmatgya maaatgtcag cacagtrcaa tgtacacatg gaattargcc     7080

agtrgtrtcw acycaaytrc tgytraatgg cagtctagca gaagaagakr tartaatyag     7140

atcwvwmaat ttyacrgaca atryyaaawc cataatagta carctgaanr mahctgtara     7200

wattmaytgt ayaagrccya acaaywatac aagraaavsw atmmvtatcc agagrggacs     7260

agggaragya wwtkwtrcaa yagrwvraat aataggarat atragacrag cayattgtaa     7320

cmttagtrrm rcaaaatgga atracacttt arrmmrgrta gytrvmaaat taaragaahw     7380

atwtggarrb aayaawacaa tartctttaa khmatcctca ggaggrgayc cagaaattgt     7440

waygcacast tttawttgtr gaggggaatt tttctwytgy aaywcaacmm arytrtttaa     7500

trgyayktgg bwtrhkaryr vwdvkwgbam trrwrskksr aatrrhvmwr vwgrdycarr     7560

wrrhamwatm asmctcccat gyagaataaa acaaattrta aacakrtggc agrragtagg     7620

aaaagcaatg tatgcccctc ccatyrvwgg acaaattmrm tgywcmtcaa ayatyacagg     7680

gctrmtatta acaagrgatg gwggyrrsma hrryrrsamb aayrrswcyg gggarrtctt     7740

yagacctgga ggaggarata tgarrgacaa ttggagaagt gaaytatata aatataaagt     7800

agtaraaatt garccattrg gagtagcacc cacyamggca aagagamgag tggtgcagag     7860

rgaaaaaaga gcartrrsrt tamtaggagc tntgttcctt gggttcttgg gagcagcagg     7920

aagcactatg ggcgcagcst cartrrcgct gacggtacag rccagacwmt tattgtctgg     7980

tatagtgcar cagcaraaca ayytgctgag ggctattgag gcgcaacarc atctgytgca     8040

actcacrgtc tggggcatya agcagctcca ggcaagartc ytrgctrtrg aaagatacct     8100

avrggatcaa cagctcctrg gratttgggg ttgctctgga aarctcatyt gcmccactrc     8160

tgtgccttgg aatgctagtt ggagtaataa atctmkrrrw saratttggr akmacaygac     8220

ctggakgsar tgggavarag aaattvayaa ttacacarry wwaatayayd myytamttgv     8280

aramtcgcar awmcarcrag aaawraatga acwagawyta ytrvvattrg atamatgggc     8340

arrtttgtgg aattggtttr rcataacama htggctgtgg tatataaaaw tattyataat     8400

gatagtagga gghttrrtag gkttaagaat artttttryt gtamtttcta tartgaatag     8460

rgttaggmag ggataytcac cattrtcrtt bcagacccdc ctcccarcyc mgaggggacc     8520

cgacaggccc graggaaymg aagaagaagg tggagagaga gacagagacr satccrkdms     8580

mttagtgrah ggatyctyrg camtywtctg ggwcgayctr cggarcctgt kyctcttcmk     8640

ctaccaccgm ttgagagact tactcttgat tgtrrygagg aytstggaac ttctgggacg     8700

cagggggtgg garryyctca artaytggtg gaatctcctr cartattgga ktcaggaact     8760

aargrrtagt gcyrttaryt tgytyaayrc cayagcyata gyagtagcyg aggggacaga     8820

tagggttata gaaryadtrc wargaryttd tagagcyaty ckcmacatac ctrbaagaat     8880

magacagggc ttrgaaagrv ytttrctata agrtgggtrg maagtggtca aaamrtarkr     8940

kdrbkggrtg gcctrmdrtr agrgaaagaa tgmramgarc yrmrccarsr ratagaacaa     9000

gacaagctga gccagcagca ganrgrgtgg gascagyatc tmgagacytg gararacatg     9060

grgcamtcac aagyagcaat acagcagcta myaatgctgm ttgtgyctgg ctagaagcac     9120

aagargadga rgrgagtgad gtgggyttyc cagtcavacc tcaggtrccy ttaagrccaa     9180

tgacttacaa ggsagctbtr gatctyagcc actttttaaa agaaragggg ggactggaag     9240

ggctarttya ctcccarmrr agacargata tycttgatct gtggrtctay cayacacaag     9300

gctwcttccc wgattrgsak aaytacacac cagggccagg grycagatwy ccmctgayct     9360

ttggatggtg ctwyaagyta gtaccagtkg adccagabva grtagaarag gccamtraag     9420

grgaraacam cwryttgtta caccckrtra rccwrcatgg gatrgahgac ccrgagarag     9480

aagtrttarw gtggargttt gacagycgcc trgcaytbcr tcacrtggcc cgrgagvwrc     9540

atccggagta ctwcaarrac tgctgacayc grrvtactac aagaaatgct gacaccgagc     9600

tkctacaagg gactttccrc tggggacttt ccrgggaggy gtggcctggg cggrachggg     9660

gagtggygar ccctcagats ctgcatataa gcagctgctt tytgcctgta ctgggtctct     9720

cyrgttagac cagatcwgag ccygggagct ctctggctar ctrgggaacc cactgcttaa     9780

gcctcaatct awagsktsmc ytrartrcwy yrrskdbygb kygsssvwbb rhkstrkkac     9840

ymkkkkawcy agasmwssyw saramssyyw wwgwmrgtgw gramaayyky twgywncacc     9900

ctatgagcca acatgggata gatnacccgg anaaagaagt attattgtgg aag            9953


<210>  12
<211>  9163
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype C: Consensus DNA Sequence


<220>
<221>  misc_feature
<222>  (6129)..(6129)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6183)..(6183)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (6887)..(6887)
<223>  n is a, c, g, or t

<400>  12
tctgttgtgt gactctggta actagagatc cctcagacct tcagtgttag tgtggaaaat       60

ctctagcagt ggcgcccgaa caggggacyk gaaagcgaaa gtraraccag agragatctc      120

tcgacgcagg actcggcttg ctgaagtgca ctcggcaaga ggcgagagcg gcgrctggtg      180

agtacgccaa tttttatttg actagcggag gctagaagga gagagatggg tgcgagagcg      240

tcartattaa gaggsgraaa attagatrmh tgggaaaraa ttargttaar gccaggggga      300

aagaaacrct atatgmtraa acacmtagtm tgggcaarca gggagctgga maratttgca      360

styraccctg rccttttaga dacakcmgma ggctgtaaac aaatawtdrm acarmtacaa      420

ccagctmttc agacaggaac araggaactt adatcattay wyaayacrrt dgcarytctc      480

tattgtgtac atvmarrgat agadrtamra gacaccaarg aagccttaga caaratarar      540

gaagarcaaa acraaaktma gcaaaaaaca cagcaggcar ragmrgmtga caragrraag      600

gwcagtcaaa attwtcctat agtrcagaat mtbcargggc aaatggtaca ycarsccmta      660

tcasctagaa cyttgaatgc rtgggtaaar gtartagagg araaggsttt yarcccagag      720

gtaataccca tgtttacagc wttatcagar ggagccaccc cacaagattt raayaccatg      780

ytaaatacrg tggggggaca ycaagcagcc atgcaratgt taaaagayac catcaatgar      840

gaggctgcag aatgggayag rttacatcca gtrcmtgcag ggcctrtygc accaggccaa      900

mtgagagamc caaggggaag tgayatagca ggaacwacya gtamccttca ggaacaarta      960

rcatggatga crrrkaaccc acctrtycca gtrggagaca tctataaaag atggataaty     1020

ctgggrytaa ataaaatagt ragratgtat agccckgtsa gcattttgga cataaracaa     1080

ggrccaaagg aaccytttag agactatgta gaycggttct ttaaaacyyt aagagcwgar     1140

caagctacmc aagakgtaaa aaattggatg acagahacct tgttggtcca aaatgcgaay     1200

ccagattgta araccatttt aagagcatta ggrccagggg ctwcattaga agaratgatg     1260

rcagcatgtc arggrgtggg aggacctrsc cacaargcaa gagtgttggc tgaggcaatg     1320

agcmaaryaa acartrsaam catamtgatg cararaagya attktaargg cyctaaaaga     1380

rywrttaaat gyttyaactg tggcaaggrr rggcachtag ccaraaattg cagggcycct     1440

aggaaaaaag gctgttggaa atgtggaaar gaaggacacc aartgaaaga ctgtacygar     1500

agrcaggcta attttttagg garamtttgg ccttccmasa rgggraggcc aggraatyty     1560

ctycagarya gamyagagcc aacagcycca ccagmgagtc tcagaccaga gccaacagcy     1620

ycaccaccag agagsttyrg gkwmgagrmr rcrachcchk ctcsgaarca ggagmygawa     1680

gacarggaas tgccyttaac ttccctcara tcactctttg gcarcgaccm cttgtywmma     1740

taarartagg gggmcagmya arrgaggctc tcttagacac rggagcagat gatacagtat     1800

tagaagaart aarwttgcca ggaaawtgga raccaaaaat gataggagga attggrggtt     1860

ttatyaaagt aagacartat gaksaratam yyatagaaat ttgtggaaaa aaggctatag     1920

gtacagtayt rgtaggrccy acacctgtca acataattgg magaaayatg ttgactcagc     1980

ttggaygcac aytaaayttt ccaatyagtc ccattgaaac tgtaccagta aaaytraagc     2040

caggaatgga tggcccaaar gtyaaacaat ggcyattgwc agaagaraar ataaaagcat     2100

taacagcaat ttgtgadgar atggagmrgg aaggaaaaat twcaaraaty gggcctgaaa     2160

ayccatataa yacyccarta ttygccataa aaaagaagga cagtactaag tggagaaaat     2220

tagtagattt cagrgaactc aataaaagaa ctyaagaytt ttgggaagtt caattaggra     2280

taccacaycc agcagggtta aaaaagaaaa aatcagtgac agtactrgat gtgggrgatg     2340

catatttytc agtwcctyta katgaagryt tyagraaata tactgcattc accataccta     2400

gtayaaacaa tgaaacacca gggattagrt atcaatataa tgtsctycca carggrtgga     2460

aaggatcacc abcaatattc carartagya ygmcmmraat cttagagccc tttagrgcmm     2520

mmaayccaga aataryyatc tatcaatata tggatgactt gtatgtaggm tctgacttag     2580

aaatagggca acatagagcm mmaatagarg arttaagara rcatctrttr argtggggat     2640

tyaccacmcc agacaagaar catcagaaag aaccyccatt tctttggatg gggtatgaac     2700

tycatcctga caaatggaca gtacagccta tacagctgcc agaaaaggat agctggacyg     2760

tcaatgatat acaraagtta gtgggaaaat taaactgggc aagtcagatt tayccaggra     2820

twmaagtaar rcaaytktgt aractyctta ggggrrccaa agcactaaca gacatagtrm     2880

cactaactga agaagcagaa ttagaattgg cagagaacag rgaaattcta aargaaccag     2940

tacatggagt rtwttatgay ccatcraarg acttratagc tgaratacag aaacargggm     3000

akraccaatg gacatwtcaa wtytaccaag aaccattcaa aaatctgaar acaggraart     3060

wtgcaaaaak rrggactgcm cacactaatg atgtaarrca gttaacagmg gywgtgcara     3120

aratagccmy rgaaagcata rtaatatggg gaaagactcc taaatttaga ytrcccatcc     3180

araaagaaac atgggarrca tggtggacag actattggca rgccacctgr attcctgart     3240

gggartttgt taatacycct cccytagtaa aattatggta ycagytrgar aargaaccca     3300

tagcagragy agaaactttc tatgtagayg gagcakctaa tagrgaaayt aaaawrggaa     3360

aagcrgggta tgttactgay araggaaggm akaaaattrt ywctmtaast gaaacmacaa     3420

atcagaagrc tgarttacar gcratyyrkc trgckttrca rgattcagga tcwgaagyaa     3480

acatagtaac agaytcacag tatgcattag gratyatycw rgcacaacca rataaragtg     3540

aatcagagwt agtyaaycaa ataatagaac arttaataar vaaggawagg gtctayctgt     3600

catgggtacc agcacayaaa ggwattggrg gaaatgaaca agtagataaa ttagtaagta     3660

gtggaatcag gaaagtrctr tttctagatg gaatarayaa rgctcaagaa gagcatgaaa     3720

rrtatcacar caattggaga gcratggcta rtgavtttaa tmtsccaccc rtagtascma     3780

aagaaatagt agctwgctgt gaymaatgtc agytaaaagg ggaagccayr catggacaag     3840

taraytgtag tccrggrata tggcaattag aytgyacaca yttagaaggr aaaatcatcc     3900

tggtagcagt ccatgtagcc agtggmtaca trgargcaga ggttatycca gcagaaacag     3960

grcargaaac agcatactwy mtactaaaat tagcaggrag atggccagtc arrgtaatac     4020

atacagayaa tggyagtaay ttcayhagtr mtrcagttaa rgcagcctgt tggtgggcag     4080

gyatycaaca ggaatttggr atyccctaca atccccaaag tcarggagta gtagaatcha     4140

tgaataaaga attaaagaaa atyataggrc argtaagaga wcaagctgag caccttaaga     4200

cagcagtaca aatggcagta ttcattcaca attttaaaag aaragggggg attggggggt     4260

acagtgcagg ggaaagaata atagayataa tagcawcaga cwtacaract aaagaaytmc     4320

aaaamcaaat twyraaartt caaaattttc gggtttatta cagagacagc agagayccya     4380

tttggaaagg accagccaaa ctactctgga aaggtgaagg ggcagtagta mtacaagata     4440

ayagtgacat aaaggtrgta ccraggagga aagyaaaaat cattarrgay tatggaaaac     4500

agatggcagg tgctgattgt rtggcargta gacaggatga rgattagaac atggaatagy     4560

ttagtaaarc aycayatgya trtttcaarg agagctartr gatggkwyta yagacatcat     4620

tatgamagya gamatccaar rrtaagttca gaagtacaca thccattagg rgaggctaga     4680

ttrrtaataa haacatattg gggkttgcaw acaggagaaa grgattggca wttgggtcat     4740

ggagtctcya tagartggag aytgagaarm tataryacac ragtagamcc tggcctggca     4800

gaccavctaa ttcatatgca ttattttgat tgttttgcag amtctgccat aagraaagcc     4860

atattaggay ahrkagttak yyctaggtgt gaytatcaag caggacataa taaggtagga     4920

tctctacaat acytggcact gacagcwytg ataaarccaa aaargrbaaa gccaccyctg     4980

cctagtrtta rdaaattagt rgargatmra tggaacaabc cccagaagay cagggrccgc     5040

aragggaacc atayaatgma tggrcaytag armttytaga ggarctcaag crggaagcwg     5100

tcagacactt tcctagacca tgkctycatr ryttaggaca ryatrtctat gmaacctatg     5160

grgayacytg gwcrggrgtv gaarybhtam taagaaywct gcaacracta mtgtttrtyc     5220

atttcagaat tggrtgccag catagcmgaa taggmatyyt rmsacaraga agagcaagaa     5280

atggagccag tagatcctaa cytagarccc tggaaccatc caggaagyca gcctarract     5340

scttgyaatm ahtgytaytg taaawrmtgy agctaycatt gtctagtttg ctttcwgrma     5400

aaaggcttag gcatttcmta tggcaggaag aagcggmgac agcgacgaag mrctcctcma     5460

agcagtragg atcatcaara tcytatayca aagcagtaag tayyaaatar tarmtgtaat     5520

gkywkwwtta hwwgbaarwd tagattatar awtagkrrta gkrgcaytsa tartagcayt     5580

aatcmtagya atarttgtgt ggaycatagy wtatatagaa tataggaaat tgbtamraca     5640

ragaaraata raywrgttar ttramagray tarrgamaga gmagaagaca gtggcaatga     5700

ragtgrdggg gataywgagg aattrkmmac aatggtggat atggggmrtc ttaggctttt     5760

ggatgdtaat ratttrtark gkrrdrgrra actygtgggt cacrgthtat tatggggtac     5820

ctgtrtggam agawgcwarh mctacwctat tytgtgcatc agaygctaaa gcatatgakr     5880

magargtrca taatgtytgg gstacaywtg cctgtgtmcc cacagacccc aryccacaag     5940

aahtrgktwt ggaaaatgtr acagaaartt ttaacatgtg graaaatgac atggtgradc     6000

agatgcatsa ggatrtaatc rgyttatggg atsaargcct aaagccatgt gtaaarttga     6060

ccccactctg tgtyacktta vahtgyarwr mtryyamhar ymvhrvtawk rdywvmmmya     6120

ryardayyna yrryrhsrrc atkrrdgaaa traaaaattg ytctttcaat ryraccacag     6180

wantaaraga taagavrvrg amrgyrhatg cactttttta tarayykgat atagtaccac     6240

ttrakaatkr rgaryaggaa aacgatarcr vytctrstgg gtaktataka ttaataaatt     6300

gyaatacytc arccmtaaca caagcctgtc caaaggtywc tttkgayccr attcctatac     6360

attattgtgc tccagckggt tatgcgatty taaagtgtar wrataagaca ttcamtggra     6420

caggaccatg cmrtaatgtc agcacartac artgyacmca tggaaytaar ccagtrgtrt     6480

caactcaact aytgttaaat ggtagymtag cagaagrdgr gayaataatt agatytraaa     6540

atctracara caatgycaaa ayaataatag tacakcttaa yvaayctgta gmrattrhkt     6600

gtacragacc crrcaataat acaagrraaa gtataaggat aggaccagga caaryattct     6660

atgcaacarr wgamataata ggarayataa gacaagcaca ttgtaacatt agtrrarmdv     6720

hrtggaayra wactytasaa vakgtarrkr araarttrvm ararcactty cmkaataaar     6780

caatarwatt tvmdhmrymm kcaggaggrg ayctagaart tacaacacat agytttaatt     6840

gtrgaggaga atttttctat tgcaatacat carryctgtt taataknaca wrcayrccta     6900

vtrrwrcwrw ragtraydyw avyrrhavhv maaaykyaaw catcacamtc cmatgcaraa     6960

taaarcaaat tataaayatg tggcaggrrg tmggacgagc aatgtatgcc cctcccattg     7020

maggaawmwt aayrtgtarm tcaartatca caggaytact aytgryacgk gatggagshr     7080

mwrrbmhdva yrvhrsmrak ammaatrasa crgagayatt cagrcctgra ggaggarata     7140

tgarggacaa ttggagaagt garttatata aatayaaagt ggtagaartt aarccaytrg     7200

gartagcacc cactamrscr aaaaggagag tggtggagag agaraaaaga gcagygggam     7260

taggagctkt rytccttggg ttcytrggar cagcaggaag cactatgggc gcrgcrtcaa     7320

taacgctgac ggtacaggyc agrcaaytrt tgtckggkat agtgcaacag caaagcaatt     7380

tgctgarrgc tatagaggcg caacagcaym tgttgcarct cacggtctgg ggcattaagc     7440

agctycagrc aagagtcctg gctatagaaa gryacctaar ggatcaacag ctcctagggm     7500

tttggggctg ctctggaaaa ctcatctgca ccactgctgt rcmttggaay tcyagttgga     7560

gtaayarrwc tcaaravkak atttggrrta acatgacmtg gatgcagtgg gatagagaaa     7620

ttartaatta yacaracaya atatacavdt tgcttgaagw vtcgcararc cagcaggavr     7680

aaaatgaama rgayttayta gcwttggaca rdtggvamaa tytrtggamt tggtttrrca     7740

taacaaaktg gctgtggtat ataaaaatat tcatmawrat agtrggaggy btgataggtt     7800

taagaataat tttkgstgtg mtytctatag traawagagt taggcaggga tactcaccht     7860

trtcgtttca gaccctymyc ccrmacccsr ggggaccmga caggctcrga rgaatcgaag     7920

aagaaggtgg agagcaagrc aragacagat ccatwcgvtt agtgarcgga ttcttagcam     7980

ttkybtggga mgacctgcgg arcctgtgcc tyttcagyta ccaccgmttg agagacttma     8040

tmttrrtkgc agsgagrryr syggaacttc tgggacgcmg cagyctcarg ggamtacaga     8100

srgggtggsa aryccttaar tatytgggar gycttgtrca gtattggrgt ctrgarytra     8160

aaaagagtgc tatwartctr yttratasma yagcaatagy agtagstgaa ggaacagata     8220

grhttmtwga akkmdtacaa rgaattkgka gagctwtcyr caacataccy agaagaatam     8280

grcagggctt kgaagcagct ttgcwataaa atggggrrca mrwkgtcaaa awgyagymya     8340

gtdggayggc ctgmtataag agaragaatv agacgarctg mkccagcagc agagggagta     8400

ggascagcrt ctcragacty agayarayay ggrgcactda cmagcagcar cacasmyvms     8460

amtaatvctg mttgtgcctg gctgsaagcr caasaggagg aagamgrrgt aggctttcca     8520

gtcagrcctc aggtrcyttt ragaccaatg acwtwtaagg sagyaktmga tctyagcytc     8580

tttttaraag aaaagggggg actggaaggg ttaatttrst cyaagaaaag gcargavaty     8640

cttgatttgt gggtctatma cacacaaggc twcttycctg attggcaaaa ctacacaccr     8700

ggaccagggg tcagrywycc mctgacyttt ggrtggtgct tyaagctagt rccagttgac     8760

ccaagkgaag trgaagarrh saayrmagga garracaacw gyttrctrca ccctrygwgc     8820

cwrcatggaa tggaggatkm msacarmgaa gtattrvwgt ggrwgtttga cagymdmcta     8880

gcacryarac aymkggcccg ygagmwacat ccggagtwtt acaacaaaga ctgctgayac     8940

rgamgtacaa rgactkytga cacmgccygg gactttccac tggggcgttc caggaggwgk     9000

ggtctgggcg ggacyrggga gtggycaacc ctcagatgct gcatataagc agctgctttt     9060

ygcytgtacy gggtctctct aggtagacca gatctgagcc tgggagctct ctggctayyt     9120

rgggaaccca ctgcttaagc ctcaataaag cttgccttga gtg                       9163


<210>  13
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  13
acgttggatg ctcttcatcc tgctgctatg                                        30


<210>  14
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  14
acgttggatg ttagaggaca aacgggcaac                                        30


<210>  15
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  15
acgttggatg caaacgggca acataccttg                                        30


<210>  16
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  16
acgttggatg tgtgtctgcg gcgttttatc                                        30


<210>  17
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  17
acgttggatg caaggtatgt tgcccgtttg                                        30


<210>  18
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  18
acgttggatg ttttgcatgg tcccgtactg                                        30


<210>  19
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  19
acgttggatg cctgatcatg tagttaatc                                         29


<210>  20
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  20
acgttggatg gccttccaaa gagtatgtaa                                        30


<210>  21
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  21
acgttggatg gttggtcatc aaaacctcgc                                        30


<210>  22
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  22
acgttggatg agggtccaac tgatgatc                                          28


<210>  23
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  23
acgttggatg tgtattccca tcccatcgtc                                        30


<210>  24
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  24
acgttggatg aactgagcca agagaaacgg                                        30


<210>  25
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  25
acgttggatg gtaaaaggag cagcaaagcc                                        30


<210>  26
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  26
acgttggatg tcctgttaac aggcctattg                                        30


<210>  27
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  27
acgttggatg tgcacttcgc ttcacctctg                                        30


<210>  28
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  28
acgttggatg tcttatgtaa gaccttgggc                                        30


<210>  29
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  29
acgttggatg actcctagcc gcttgttttg                                        30


<210>  30
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  30
acgttggatg gaggacgaca gaattgtcag                                        30


<210>  31
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  31
acgttggatg agagtctaga ctcgtggtgg                                        30


<210>  32
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  32
acgttggatg gactgcgaat tttggccaag                                        30


<210>  33
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  33
tgataatcca gaagaaccaa                                                   20


<210>  34
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  34
gcgttttatc atattcctct                                                   20


<210>  35
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  35
gcccgtactg gttgttgttg                                                   20


<210>  36
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  36
cttccaaaga gtatgtaaat aatg                                              24


<210>  37
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  37
tccaactgat gatcgggaaa                                                   20


<210>  38
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  38
actcccatag gtattttgc                                                    19


<210>  39
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  39
tggaaagtat gtcaaagaat t                                                 21


<210>  40
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  40
gagatgatgg gcgttcacgg                                                   20


<210>  41
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  41
agaattgtca gttccgatga gtt                                               23


<210>  42
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  42
attttggcca agacacacgg                                                   20


<210>  43
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  43
acgttggatg agccaagtaa caaatccagc                                        30


<210>  44
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  44
acgttggatg gtgcccttct ttgccacaat                                        30


<210>  45
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  45
acgttggatg aggattgtgg aacttctggg                                        30


<210>  46
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  46
acgttggatg tcctgactcc aatactgtag                                        30


<210>  47
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  47
acgttggatg aatcactctt tggcagcgac                                        30


<210>  48
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  48
acgttggatg tactgtatca tctgctcctg                                        30


<210>  49
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  49
acgttggatg ggaaattggt aagacaaagc                                        30


<210>  50
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  50
acgttggatg ctctcattgc cactgtcttc                                        30


<210>  51
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  51
cttaacagtc tttctttggt                                                   20


<210>  52
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  52
atactgtagg agattccac                                                    19


<210>  53
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  53
tctgctcctg tgtctaa                                                      17


<210>  54
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  54
tcttctgctc tttccct                                                      17


<210>  55
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype A: Partial Genomic DNA comprising genomic signature

<400>  55
ctgctatgcc tcatcttctt attggttctt ctggattatc a                           41


<210>  56
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype B: Partial Genomic DNA comprising genomic signature

<400>  56
gcgttttatc atcttcctct gcatcctgct gctatgcctc a                           41


<210>  57
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype C: Partial Genomic DNA comprising genomic signature

<400>  57
tttgtcctct acttccagga acatcaacta ccagcacggg a                           41


<210>  58
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype C: Partial Genomic DNA comprising genomic signature

<400>  58
aatcattact tcaaaactag gcattattta catactctgt g                           41


<210>  59
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype D: Partial Genomic DNA comprising genomic signature

<400>  59
tcaattttct agggggaacy accgtgtgtc ttggccaaaa t                           41


<210>  60
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype E: Partial Genomic DNA comprising genomic signature

<400>  60
accaccaatc ctctgggatt ttttcccgac caccagttgg a                           41


<210>  61
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype F: Partial Genomic DNA comprising genomic signature

<400>  61
atcccatcat cytgggcttt aggaaaatac ctatgggagt g                           41


<210>  62
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype G: Partial Genomic DNA comprising genomic signature

<400>  62
ggaaagtctg tcaacgaata actggtctgt tgggtttcgc t                           41


<210>  63
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype G: Partial Genomic DNA comprising genomic signature

<400>  63
ctgcacgtta catggaaacc gccatgaaca cctctcatca t                           41


<210>  64
<211>  41
<212>  DNA
<213>  Hepatitis B Virus- Genotype H: Partial Genomic DNA comprising genomic signature

<400>  64
ctcgcagcmg gtctggagcg gacattatcg gcactgacaa c                           41


<210>  65
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype A1: Partial Genomic DNA comprising genomic signature

<400>  65
tttraatrtr atgctraaca tagtgggggg acaycaggca g                           41


<210>  66
<211>  39
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype A1: Partial Genomic DNA comprising genomic signature

<400>  66
tcattcaggc mcarccagac arragtgaat cagarwtag                              39


<210>  67
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype A2: Partial Genomic DNA comprising genomic signature

<400>  67
gyaattggag agcmatggct catgacttta atctrccacc t                           41


<210>  68
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype A2: Partial Genomic DNA comprising genomic signature

<400>  68
acatggaatt adrccagtag catcaactca actgctgytg a                           41


<210>  69
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype B: Partial Genomic DNA comprising genomic signature

<400>  69
tacagaaagg caattttagg aaccaaagaa agactgttaa g                           41


<210>  70
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype B: Partial Genomic DNA comprising genomic signature

<400>  70
gtgggaagcc ctcaaatatt ggtggaatct cctacagtat t                           41


<210>  71
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype C: Partial Genomic DNA comprising genomic signature

<400>  71
ggccaaataa aagaggctct cttagacaca ggagcagatg a                           41


<210>  72
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype C: Partial Genomic DNA comprising genomic signature

<400>  72
aactggttaa ttaaaagaat tagggaaaga gcagaagaca g                           41


<210>  73
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype D: Partial Genomic DNA comprising genomic signature

<400>  73
agactgartt acaagcmatw aayctagcyt tgcaggattc g                           41


<210>  74
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype D: Partial Genomic DNA comprising genomic signature

<400>  74
ttgggarcag caggaagcac gatgggcgca sbgtcabtga c                           41


<210>  75
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype F1: Partial Genomic DNA comprising genomic signature

<400>  75
gamatstata aaagatggat catcctagga ttaaataaaa t                           41


<210>  76
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype F1: Partial Genomic DNA comprising genomic signature

<400>  76
rgcktgtccm aagrtrwcct gtgagccwat tcccatacat t                           41


<210>  77
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype F2: Partial Genomic DNA comprising genomic signature

<400>  77
ctatacaatt gccaramaag agcagctgga ctgtcaatga t                           41


<210>  78
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype F2: Partial Genomic DNA comprising genomic signature


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is a, c, g, or t

<400>  78
akrnwrmyrr bwmhgasayy ctcagacctr kaggrggaga k                           41


<210>  79
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype G: Partial Genomic DNA comprising genomic signature

<400>  79
gargtccmat taggaatacc tcayccyksr gggttaaaam a                           41


<210>  80
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype G: Partial Genomic DNA comprising genomic signature

<400>  80
attatggrgt acctgtgtgg gargaygcar akrccmcyct a                           41


<210>  81
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype H: Partial Genomic DNA comprising genomic signature

<400>  81
rgagtttgtt aacacccctc atctagtraa attatggtat c                           41


<210>  82
<211>  40
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype H: Partial Genomic DNA comprising genomic signature

<400>  82
cttggatgga rtgggayara caaattrrca attacacaga                             40


<210>  83
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype J: Partial Genomic DNA comprising genomic signature

<400>  83
ttatcaaagt ragacagtat aaygakrtac ysatagaaat t                           41


<210>  84
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype J: Partial Genomic DNA comprising genomic signature

<400>  84
tgcakgawga tataatcagt gtatgggatg aaagcttaaa r                           41


<210>  85
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype K: Partial Genomic DNA comprising genomic signature

<400>  85
aaaaatccag awatggttwt ataccaatac atggatgatt t                           41


<210>  86
<211>  41
<212>  DNA
<213>  Human Immunodeficiency Virus-Genotype K: Partial Genomic DNA comprising genomic signature

<400>  86
yamagagctt ttagagcttt acttcacata cctagaagaa t                           41


